Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 656 a.a., Macrolide export ATP-binding/permease protein MacB from Alteromonas macleodii MIT1002

 Score = 51.2 bits (121), Expect = 9e-11
 Identities = 97/433 (22%), Positives = 178/433 (41%), Gaps = 69/433 (15%)

Query: 5   LNLAWKSLLNRKATALLTVLTVAIAVVLLLGVERIRTQAKESFANTIS--GTDLIV---G 59
           L++A+ +L       LLT+L + I V  ++ +  I    K+     I   GT+LI    G
Sbjct: 268 LSMAFTALRMNWFRTLLTLLGIIIGVAAVVTMMAIGEGGKQQVLERIETIGTNLISIRPG 327

Query: 60  GRSGQVNLLLYSVFRIGNATNNIDWKSYQEFSQHPAVKWAIP-------ISLGDSHKGFR 112
           GR+ + +  + S+  + +AT              P V +  P       I   ++    R
Sbjct: 328 GRNMRSSGDIASL-TLADAT---------ALKSVPGVAYVAPERSARATIRYSENDFSGR 377

Query: 113 VLGTNHSYFEHYRYGSKQPLTLSQGREFNGLFETVIGADVAQALGYQ----VGSQIIIAH 168
           + GT   YF    +   Q +  S     N     VIG  VA+ L       VG  I++  
Sbjct: 378 ITGTTPDYFHAKDWEMAQGVFFSDEDVTNYAPVVVIGDTVAETLFEDKYRAVGEYILM-- 435

Query: 169 GISDVGFSRHDNLPFTVVGIL-----APTGTPVDKTVHVSLEAIEAIHVGWESGANLGHQ 223
                      N  + VVG+L     +  G  +D  V + +        G +  +++  +
Sbjct: 436 ----------QNAFYQVVGVLHSKGASAGGNDMDDEVLIPVTTGRLKVFGRDYLSSITIK 485

Query: 224 PSAEQLAQRDFTPKQITAMLVGLKSKIQTFALQRQINDYPQEPLSAIMPGVALHELWGMM 283
             + ++A +      + A+LV           Q  +     E L   +        W + 
Sbjct: 486 AESTEVATQ--VKDDVLALLVERHG-------QEDVMVRTTESLVEAVTETQDTLTWLLA 536

Query: 284 SVAEQALMAVSVFVVVAGLLGMLSSLLTSLQERRREMSILRAMGARPQHVFALLVSEASV 343
           SVA     A+S+FV   G +G+++ +L ++ ER+RE+ +  A GA+P+ +      EA V
Sbjct: 537 SVA-----AISLFV---GGIGVMNIMLVNVSERKREIGLRIATGAKPRDILRQFNIEAWV 588

Query: 344 LTLVGILLGVSVLYLLLALAAPLIASQYGIQIALAGLTAYEWQLLGCVQLA-GIVIGFIP 402
           + ++G + G+ + Y ++     LI + + + +A    T     L     LA G++ G+ P
Sbjct: 589 VCILGGIFGILLGYFVV-----LIVASFSVPVA---YTLMPPVLAFVTSLAVGLIFGYAP 640

Query: 403 ALRAYRQSLSDGM 415
           A +A + +  D +
Sbjct: 641 AQKASKLNPIDAL 653