Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 59.7 bits (143), Expect = 2e-13
 Identities = 98/427 (22%), Positives = 177/427 (41%), Gaps = 71/427 (16%)

Query: 7   LAWKSLLNRKATALLTVLTVAIAVVLLLGVERIRTQAKESFANTIS--GTDLIVGGRSGQ 64
           LA +++      + LTVL V I V  ++ +  I     E   + +S  GT+++   R GQ
Sbjct: 8   LALRAISRNLLRSFLTVLGVVIGVAAVIAMVTIGNGTTEQVKSELSRLGTNMLFV-RPGQ 66

Query: 65  VNLLLYSVFRIGNATNNIDWKSYQEF-SQHPAVKWAIP--------ISLGDSHKGFRVLG 115
                +   R        D +  +   +Q   ++   P        +  G  +    V+G
Sbjct: 67  -----FGPGRASTEAKRFDDRDVEAIRNQISGIRAVAPQNRSSAATVIFGGKNHQTSVIG 121

Query: 116 TNHSYFEHYRYGSKQPLTLSQGREFN------GLFETVIGADVAQALGYQVGSQIIIAHG 169
           T + Y         Q  T++ GR+F       G    +IG  V Q L    G++  +   
Sbjct: 122 TTNDYL------IAQDWTIALGRDFQPAEDRGGQIGCIIGETVRQEL---FGAENPVGQT 172

Query: 170 ISDVGFSRHDNLPFTVVGILAPTGTP-----VDKTVHVSLEAIEAIHVGWESGANLGHQP 224
           I      R  N+   V+G+LA  G        D T+ + L+ I    +G  +  +     
Sbjct: 173 I------RVSNISCPVIGVLARKGQSGLGDDQDDTIIMPLK-IHQRRIGGTTTIS----- 220

Query: 225 SAEQLAQRDFTPKQITAMLVGLKSKIQTFALQRQINDYPQEPLSAIMPGVALHELWGMMS 284
           S    AQ   +  ++ + L  L  + +   + R+ +D+    ++ I   +      G  +
Sbjct: 221 SIMVSAQDGVSTAKVQSDLQNLLRERRRINIGRE-DDFTVNDMTQIASAMT-----GTTT 274

Query: 285 VAEQALMAVSVFVVVAGLLGMLSSLLTSLQERRREMSILRAMGARPQHVFALLVSEASVL 344
           +    L AV+   ++ G +G+++ +L S+ ER RE+ I  A+GA  + V    + EA +L
Sbjct: 275 LLTGLLGAVAAVSLLVGGIGIMNIMLVSVTERTREIGIRLAIGALEKQVLTQFLVEAVML 334

Query: 345 T----LVGILLGVSVLYLLLA-LAAPLIASQYGIQIALAGLTAYEWQLLGCVQLAGIVIG 399
           +    +VGIL G+ + Y +++ L  P + S   I +A A   A            G++ G
Sbjct: 335 SAFGGIVGILTGLGLAYSVVSFLNVPFVTSPSIIFLAFAFSAA-----------IGVIFG 383

Query: 400 FIPALRA 406
           + PA RA
Sbjct: 384 YFPARRA 390