Pairwise Alignments

Query, 238 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Variovorax sp. SCN45

 Score =  236 bits (601), Expect = 4e-67
 Identities = 122/217 (56%), Positives = 154/217 (70%), Gaps = 2/217 (0%)

Query: 20  FCWPGASSPTLDIAHLQIARGEHLFVKGPSGCGKSTLLSLLTGINTATQGVVSLLGSDLS 79
           F WPG  +P +DI   +I  GE +F+ GPSGCGKSTLLSLL G+  A +G V+LLG D S
Sbjct: 23  FSWPGVKTPCIDIEAFRITAGESVFLHGPSGCGKSTLLSLLAGVLVADEGRVTLLGHDWS 82

Query: 80  RLSASQRDRFRADHIGYIFQQFNLLPYLSVLDNVTLPCHFSALRKQQV--DGPLSHKAQS 137
           +LS +QRDR R  H+GYIFQQFNLLPYLSV+DNV LPC FSA R+ Q   +G    +A+ 
Sbjct: 83  KLSGAQRDRSRVAHVGYIFQQFNLLPYLSVIDNVLLPCRFSARRESQAARNGSARQEAEH 142

Query: 138 LLERLHLPSALLNKPVTELSIGQQQRVAAARALMGEPQLIIADEPTSALDYDNREAFIAL 197
           LL ++ L   L  +   +LS+GQQQRVAAARAL+G+P+++IADEPTSALD D REAF+ +
Sbjct: 143 LLAQMGLDRNLWKRQALQLSVGQQQRVAAARALIGQPEVVIADEPTSALDEDRREAFLDV 202

Query: 198 LREEAERVGSTLVFVSHDPTLEKLFERSVHLPTLNRA 234
           L     +  S LVFVSHD  + + F R V LP +NRA
Sbjct: 203 LLTACAQNHSALVFVSHDQRIAQRFVRHVLLPEINRA 239