Pairwise Alignments

Query, 238 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Sphingobium sp. HT1-2

 Score =  125 bits (315), Expect = 5e-34
 Identities = 76/222 (34%), Positives = 127/222 (57%), Gaps = 8/222 (3%)

Query: 9   TSSVIELNDV--VFCWPGASSPTLDIAHLQIARGEHLFVKGPSGCGKSTLLSLLTGINTA 66
           T +++ L ++  V+      +  LD   L I +GE + + GPSGCGKSTLL+++  +++ 
Sbjct: 2   TQALLSLRELSRVYRTDMVETTALDAIDLDIFQGEFVAIMGPSGCGKSTLLNMIGMLDSP 61

Query: 67  TQGVVSLLGSDLSRLSASQRDRFRADHIGYIFQQFNLLPYLSVLDNVTLPCHFSALRKQQ 126
           + G      ++++ L   +    R  H+G+IFQ FNL+  LSV +N+ L   + A+   +
Sbjct: 62  SSGSYRFGDTEIAGLPEPRLAGIRKTHLGFIFQSFNLIDELSVAENIELALLYHAMPAAE 121

Query: 127 VDGPLSHKAQSLLERLHLPSALLNKPVTELSIGQQQRVAAARALMGEPQLIIADEPTSAL 186
                  K +++++R+ +     ++P ++LS GQQQRVA ARAL+ EP+LI+ADEPT  L
Sbjct: 122 ----RKAKVEAVMDRVGIAHRARHRP-SQLSGGQQQRVAVARALVSEPRLILADEPTGNL 176

Query: 187 DYDNREAFIALLREEAERVGSTLVFVSHDPTLEKLFERSVHL 228
           D  + E  + +L +     GST+V V+H P       R VH+
Sbjct: 177 DTSHGEEVMKML-QTLNAEGSTIVMVTHSPAHADYASRVVHM 217