Pairwise Alignments

Query, 238 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., Uncharacterized metabolite ABC transporter in Enterobacteriaceae, ATP-binding protein EC-YbbA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  136 bits (342), Expect = 4e-37
 Identities = 80/194 (41%), Positives = 114/194 (58%), Gaps = 5/194 (2%)

Query: 35  LQIARGEHLFVKGPSGCGKSTLLSLLTGINTATQGVVSLLGSDLSRLSASQRDRFRADHI 94
           L + RGE + + G SG GKSTLL++L G++  + G VSL+G  L ++    R + RA H+
Sbjct: 31  LVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGKPLHQMDEEARAQLRAQHV 90

Query: 95  GYIFQQFNLLPYLSVLDNVTLPCHFSALRKQQVDGPLSHKAQSLLERLHLPSALLNKPVT 154
           G++FQ F L+P L+ L+NV LP    AL + +  G     A++LLE+L L   L + P  
Sbjct: 91  GFVFQSFMLIPTLNALENVELP----ALLRGENSGQSKAGAKALLEQLGLGKRLDHLP-A 145

Query: 155 ELSIGQQQRVAAARALMGEPQLIIADEPTSALDYDNREAFIALLREEAERVGSTLVFVSH 214
           +LS G+QQRVA ARA  G P ++ ADEPT  LD    +    LL       G+TL+ V+H
Sbjct: 146 QLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTH 205

Query: 215 DPTLEKLFERSVHL 228
           DP L    +R + L
Sbjct: 206 DPALAARCDRRLRL 219