Pairwise Alignments

Query, 238 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Enterobacter asburiae PDN3

 Score =  133 bits (335), Expect = 7e-36
 Identities = 80/221 (36%), Positives = 134/221 (60%), Gaps = 10/221 (4%)

Query: 11  SVIELNDVVFCWPGASSPT--LDIAHLQIARGEHLFVKGPSGCGKSTLLSLLTGINTATQ 68
           +++ELN++   +P    P   L    L++  GE + + G SG GKSTL+++L  ++  T 
Sbjct: 3   ALLELNNIRRSYPSGDGPVEVLKGISLRVEAGEMVAIVGASGSGKSTLMNILGCLDKPTS 62

Query: 69  GVVSLLGSDLSRLSASQRDRFRADHIGYIFQQFNLLPYLSVLDNVTLPCHFSAL-RKQQV 127
           G   + G+D+S L      + R +H G+IFQ+++LL +L+   NV +P  ++ + RK+++
Sbjct: 63  GTYRVAGTDVSTLDGDALAKLRREHFGFIFQRYHLLSHLNAAQNVEVPAVYAGVERKKRL 122

Query: 128 DGPLSHKAQSLLERLHLPSALLNKPVTELSIGQQQRVAAARALMGEPQLIIADEPTSALD 187
           +     +AQ LL RL L   +  +P ++LS GQQQRV+ ARALM   Q+I+ADEPT ALD
Sbjct: 123 E-----RAQMLLTRLGLAERVEYQP-SQLSGGQQQRVSIARALMNGGQVILADEPTGALD 176

Query: 188 YDNREAFIALLREEAERVGSTLVFVSHDPTLEKLFERSVHL 228
             + E  +A+L +  ++ G T++ V+HDP +    ER + +
Sbjct: 177 SHSGEEVMAILHQLRDQ-GHTVIIVTHDPQVAAQAERIIEI 216