Pairwise Alignments

Query, 582 a.a., outer membrane protein assembly factor from Vibrio cholerae E7946 ATCC 55056

Subject, 588 a.a., autotransporter assembly complex protein TamA from Rhodanobacter sp000427505 FW510-R12

 Score =  218 bits (555), Expect = 5e-61
 Identities = 164/593 (27%), Positives = 279/593 (47%), Gaps = 33/593 (5%)

Query: 13  RRKSLPALISLWLFSAVSYADVKLEITGISGAEKDNVEA--YLSSIAAQDYSTSL--RFQ 68
           RR SL  L+SL L ++ ++A V+L + GI+   K    A   LS  + +D S +   R  
Sbjct: 6   RRPSL--LLSLLLLASQAHAGVQLVVDGIADPLKAAATAGMELSQYSHRDVSAAQAKRLY 63

Query: 69  SQLERSMTEALNALGYYHPSIDFTVSEDNQ--RLRAAVTLGEVTRLSEVDIVIRGEAEGD 126
            +    +  AL   GYY  S+   +    +  R+   V  GE  +++ V++ +  EA   
Sbjct: 64  QRASDQLKAALEPHGYYDASVTGELQPVGKDWRVTLHVQPGEPVKVTSVEVRLAPEAAAL 123

Query: 127 RDFQRLIRRSGLRVDAPLNHSLYDNLKSGIRNLALQKGYFNGDFQASRLEVIPELNQARV 186
              +R  R         L+H  YD  +  +       G+ +      R+EV    + A +
Sbjct: 124 APIRRAKRTLERLQGKTLDHGAYDAARDALSAQLTANGFLDARLLTHRVEVTRASHSAAI 183

Query: 187 ILHFDSGIRYLFGATTVEGSQIDENRVMSLRPFKQGEPYLVSQVGEFNQNLSNTDWFSSV 246
            L + +G RY +G    +G+Q  +  +    PFK G+ +   Q+ E  Q L+  D+F+ V
Sbjct: 184 KLAWQAGPRYRYGQVHFDGAQFKDGFLDRYVPFKSGDYFSQKQLLELQQVLNGADYFAVV 243

Query: 247 FVEPDLSQLDEGRELPIKVTLAPQARNQLETG---LGYSTDVGVRGSLKWKKPWVNSQGH 303
            V+P++     G  + + V LAP A+  + TG   +G  T  GVR  ++  + WVN +GH
Sbjct: 244 NVQPEMDHAKHG-VVDVTVQLAP-AKRTIYTGGPFIGTDTGFGVRAGME--RRWVNRRGH 299

Query: 304 SFDSSFSLSIPEQTITAGYKIPLEDALNEYYRIQYGMKHLDKRDTES--LESNLSLERHW 361
            + +   ++   +T++  Y IP+       Y I    +  +   ++S  LE   +  R W
Sbjct: 300 QWKNELVVAQKLKTLSTLYSIPMPGNNQRSYNIGANFRDANTATSQSRTLELVGNETRQW 359

Query: 362 QLDGGWHRTVFIRYLLENY---RQGLQDDNS-------QFLLPGMTYTRTRTRSNSGLLT 411
               GW R++ +  L   +   ++G + DN+         L+ G      +   N   ++
Sbjct: 360 H---GWTRSLGVHVLSGTFTVGKRGGEPDNTPGVEHGHSTLVFGEAALTRKQADNPDFVS 416

Query: 412 WGDKQTITLEYGDPALLSETRVLRLQTGSSWLRTYARNHRALVRVDGGANLVDEFDQLSP 471
            G   ++         LS+     L   + W+R + R +R ++R   G    D+F  L P
Sbjct: 417 RGWLLSVAARSTAGRALSDASFSELTADAKWIRAFGRRNRLILRGSAGVTWTDDFAALPP 476

Query: 472 SLRFFAGGDNNLRGYGYKSISPQDASGALTGAKYIATSSIEYQYRLTGNWWAAMFMDVGD 531
            LRFFAGGD ++RGYGY+SI P++++  + G  ++  +S E ++  T NW  A F+D G+
Sbjct: 477 QLRFFAGGDRSVRGYGYQSIGPRNSADRVLGGHHLLVASSEVEHYFTRNWGMAAFVDAGN 536

Query: 532 AFNDNPEW--KKGVGTGIRWISPVGPIRLDFAWGLDAAPGDEFKIHFTLGPEL 582
           AF D  ++  K G G G+RW SPVG IR+D    L        ++H  +GP+L
Sbjct: 537 AF-DGTDYRPKIGAGLGLRWRSPVGMIRVDLGTPLHDDRAHGIRLHLVIGPDL 588