Pairwise Alignments

Query, 582 a.a., outer membrane protein assembly factor from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., Surface antigen (D15) precursor from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  140 bits (353), Expect = 2e-37
 Identities = 149/580 (25%), Positives = 243/580 (41%), Gaps = 94/580 (16%)

Query: 74  SMTEALNALGYYHPSIDF----------TVSEDNQRLRAAVTLGEVT------RLSEV-- 115
           ++ E L  LG++ P+++             + + +R   A +LG +T       L++V  
Sbjct: 111 NVRELLATLGHFSPTVEVIPPPGLGEAAAATRNEERAAHAGSLGTITVRVDPGPLTQVAS 170

Query: 116 -------DIVIRGEAEGDR-DFQRLIRRSGLRVDAPLNHSLYDNLKSGIRNLALQKGYFN 167
                  DI    EAE  R D QR +    L    P + + +D  K+      + + Y  
Sbjct: 171 TTVSFVGDIASAPEAEAQRADIQREV---DLIAGLPFSQADWDRTKTAALRRLIAQRYPL 227

Query: 168 GDFQASRLEVIPELNQARVILHFDSGIRYLFGATTVEGSQ----IDENRVMSLRPFKQGE 223
           G  Q S  ++  + +QAR+ +  DSG     G   V+G++    +   R++ L     G 
Sbjct: 228 GRIQNSLADIDAQTHQARLYIELDSGQAMRMGEVVVQGAERYDAVTAERLVRLTGLTPGS 287

Query: 224 PYLVSQVGEFNQNLSNTDWFSSVFVEPDLSQLDEGRELPIKVTLAPQARNQLETGLGYST 283
            Y + ++ +  + ++ + ++ SVFV  + S   +G+ LP+ V L    R ++  G+G ST
Sbjct: 288 DYDLDKLQDAQRRIAESGYYDSVFVYAEPST--DGQTLPVMVQLRESKRQKVVIGIGGST 345

Query: 284 DVGVRGSLKWKKPWVNSQGHSFDSSFSLSIPEQTITAGYK-IPLEDALNEYYRIQYGMKH 342
           D G R SL+     V   G    S   L   +Q  +  +  IP  D   +    Q   K 
Sbjct: 346 DNGARLSLEHTHNSVPGIGWRAVSKLQLERDDQLASTEWSSIPNNDGWRKIAGAQLA-KQ 404

Query: 343 LDKRDTESLESNLSLERHWQLDGGWHRTVFIRYLLENYRQGL-----QDDNSQFLLPGMT 397
           LD   T S  S        QL   + R+ +++Y   + +  L     Q++    +     
Sbjct: 405 LDDFTTTS--SQRLRVGQTQLGVEYDRSFYLQYDRAHVKSSLLSAAAQEEAKSSISANYA 462

Query: 398 YTRTRTRS----NSGLLTWGDKQTITLEYGDPALLSETRVLRLQTGSSWLRTYARNHRAL 453
           +TR R       N G         + +E G    L  TR+   +T + WL  +     AL
Sbjct: 463 WTRRRFDDQVFPNRGY-------GLAVELGVGYTLGSTRLPFTRTQARWLTYWPLGAIAL 515

Query: 454 -------------------------VRVDGGANLVDEFDQLSPSLRFFAGGDNNLRGYGY 488
                                    +RV+GGA +  E   +  +  F  GGDN +RGYG 
Sbjct: 516 AADPVPGQPRDLSTPSRRTQLGRLALRVEGGAVVARESAPIPDTQLFMTGGDNTVRGYGL 575

Query: 489 KSISPQDASGALTGAKYIATSSIEYQYRL-----TGNWWAAMFMDVGDAFND----NPEW 539
           + I    A G++   +Y    S+E+Q  +       NW   +F+D G   N      P W
Sbjct: 576 RDIGVPRADGSIGPGRYKGVVSLEWQRPIWNDDQRSNWENVLFIDGGAIANKAGDLKPVW 635

Query: 540 KKGVGTGIRWISPVGPIRLDFAWGLDAAPGDEFKIHFTLG 579
             GVGTGIR+ SPVGP++LD A+GL+      F+IH  +G
Sbjct: 636 --GVGTGIRYNSPVGPLQLDLAYGLETR---RFRIHLNVG 670