Pairwise Alignments

Query, 582 a.a., outer membrane protein assembly factor from Vibrio cholerae E7946 ATCC 55056

Subject, 574 a.a., outer membrane protein assembly factor from Dickeya dianthicola ME23

 Score =  443 bits (1139), Expect = e-128
 Identities = 228/563 (40%), Positives = 334/563 (59%), Gaps = 10/563 (1%)

Query: 28  AVSYADVKLEITGISGAEKDNVEAYLSSIAAQDYSTSLRFQSQLERSMTEALNALGYYHP 87
           A++ ++V+L++TG+ G  + NV A LS+I   + +   RF+++++ ++ + L ALGYY P
Sbjct: 14  ALAASNVRLQLTGLEGELQKNVRARLSTITPDEVNADGRFRTRVDEAVRKGLRALGYYDP 73

Query: 88  SIDFTVSEDNQR----LRAAVTLGEVTRLSEVDIVIRGEAEGDRDFQRLIRRSGLRVDAP 143
            I F       R    L+  V  GE  +++   I IRG A+ D D+Q+L+R+    V   
Sbjct: 74  EIRFEFIPAQGRGRPVLKVTVKPGEPVKIAGASIAIRGGAQSDEDYQKLVRQHRPAVGRV 133

Query: 144 LNHSLYDNLKSGIRNLALQKGYFNGDFQASRLEVIPELNQARVILHFDSGIRYLFGATTV 203
           LNH  YD+ K+ +  L+++KGYF+G F  S+L V+P  +QA   + +DSG RY FG    
Sbjct: 134 LNHGAYDDFKNELNTLSMRKGYFDGRFNKSQLGVMPSTHQAWWDIDYDSGTRYRFGKVNF 193

Query: 204 EGSQIDENRVMSLRPFKQGEPYLVSQVGEFNQNLSNTDWFSSVFVEPDLSQLDEGRELPI 263
            GSQI    + +L PF++G+ Y   Q+GEFN+ LS T WF+S  V PD       + LP+
Sbjct: 194 RGSQIQTAYLRNLVPFQEGDVYSAEQLGEFNRRLSATGWFNSAVVAPDFGPGRRNKVLPL 253

Query: 264 KVTLAPQARNQLETGLGYSTDVGVRGSLKWKKPWVNSQGHSFDSSFSLSIPEQTITAGYK 323
              L P+  N +ETG GY+TDVG R    WK+PWVN+ GHS +SS SLS PEQ +   YK
Sbjct: 254 DAVLTPRTHNNVETGGGYATDVGPRLKTTWKRPWVNAYGHSLESSLSLSTPEQQLDLSYK 313

Query: 324 IP-LEDALNEYYRIQYGMKHLDKRDTESLESNLSLERHWQLDGGWHRTVFIRYLLENYRQ 382
           IP L+  L +YY +Q G K  D  DT+S  ++ +L R+W+L  GW R V + + L+++ Q
Sbjct: 314 IPLLKSPLEQYYLVQGGFKREDLNDTQSDSTSFNLARYWELSSGWQRAVNLHWTLDHFTQ 373

Query: 383 GLQDDNSQFLLPGMTYTRTRTRSNSGLL-TWGDKQTITLEYGDPALLSETRVLRLQTGSS 441
               + +  + PG+++ RTR R   GL+  WGD Q  +++  +    S+      Q  + 
Sbjct: 374 ANVTNTTMLIYPGLSFNRTRQR--GGLMPDWGDTQRYSVDVSNTLWGSDIDFAVFQAQNV 431

Query: 442 WLRTYARNHRALVRVDGGANLVDEFDQLSPSLRFFAGGDNNLRGYGYKSISPQDASGALT 501
           W+RT A  HR + R + G      F ++ PSLRFFAGGD ++RGY YKS+SP+D+ G LT
Sbjct: 432 WIRTLAEKHRFVARANLGWIETSSFSRVPPSLRFFAGGDRSIRGYKYKSVSPRDSDGKLT 491

Query: 502 GAKYIATSSIEYQYRLTGNWWAAMFMDVGDAFND--NPEWKKGVGTGIRWISPVGPIRLD 559
           GA  +   S+EYQY +TG WW A+F+D G+A ND      K G G G+RW SPVGPI+LD
Sbjct: 492 GASKLTAGSLEYQYNVTGKWWGAVFVDSGEAVNDLARTNLKTGAGIGVRWASPVGPIKLD 551

Query: 560 FAWGLDAAPGDEFKIHFTLGPEL 582
            A  +        + +  LGPEL
Sbjct: 552 IARPIGDNDKHGLQFYIGLGPEL 574