Pairwise Alignments

Query, 1254 a.a., DUF490 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1401 a.a., Inner membrane component of TAM transport system from Sphingobium sp. HT1-2

 Score = 57.8 bits (138), Expect = 7e-12
 Identities = 72/354 (20%), Positives = 142/354 (40%), Gaps = 13/354 (3%)

Query: 844  DFLQPLIG-ELSEAKSNINADVQFHGPMLHPQLNGEIAINDIRVKGEISPVDVQSGQVSL 902
            D L  L G E+ +    ++     HG +  P + G +A ++  +   ++ + +++ +   
Sbjct: 988  DTLWRLTGVEIVDIAGPVSVTADAHGTLADPVITGSLATDNAALNSPVTGMRLRNVKARA 1047

Query: 903  KFNGYQAVLNADIQTTD--GLLEVDGDADWQQIEDWRLKARVHAPSMMVELPPMVRVKVI 960
            +F G Q V ++        G +   G+  +  I    +     A +  +     +   V 
Sbjct: 1048 RFAGAQLVFSSFTANAQNGGSVTGTGNFTFNGIGGVGMDLAFQADNAALLERDDIAATVT 1107

Query: 961  PDLTLTMQPQLARVTGNIALPWGRIVVEELPPSAIGVSKDQILLNADFEPLTDKERIPFS 1020
              LT+    +   + G++ L   R  +      A       I +N   E + ++ R    
Sbjct: 1108 GPLTIRSDGKGGEIGGDVTLNRSRFTMGRAAAVAQIPELKVIEINRRGEEI-ERPRAAEP 1166

Query: 1021 VESDVNVQIGDDFQLSAFGLQGNLVGRLNVAQKDKGPFILGEVNIRNGQYRSFGQDLQIK 1080
                V  +  +   ++  GL       LN+      P I G   +  G Y   G+  +++
Sbjct: 1167 WTMAVKARARNRLTVTGLGLDSEWRADLNIGGTVTNPAIAGRAELVRGNYEFAGRRFELR 1226

Query: 1081 EGKILMNG--PVDQPYLAITAIRNPNNTQDGVVAGVRVSGPSDEPSLTIFSEPAMPQANA 1138
            EG+I  +G  PV+ P L I A  + ++    + A + V G   +P ++  S P++PQ   
Sbjct: 1227 EGRIQFDGKTPVN-PTLDIDAEADVSD----LTATIHVGGTGLKPDISFNSVPSLPQDEL 1281

Query: 1139 LSYLLRGQNIDGEAGGNAMTTTLIGLSLAQSGKL--VGEIGQAFGVQDLQLDTA 1190
            LS +L G +I   +   A+       SL   G L  +  + +A G+  L++  A
Sbjct: 1282 LSRILFGTSITNLSAPEALQLASAVGSLQGEGGLDPINAVRKAAGLDRLRIIAA 1335



 Score = 32.3 bits (72), Expect = 3e-04
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 7/119 (5%)

Query: 7   KWTKWLSMSLLVLVILLVLALAGALFTNPGLHVVLWGAQQALP----QLKVEQAQGALFP 62
           +W +WL+   L L +L+V+A    L + PG   ++       P    ++ V++ +G+++ 
Sbjct: 28  RWQRWLA-GALALALLVVVATLAWLDSAPGHRFLVSRIAAVSPPSGLRIHVDRIEGSIYR 86

Query: 63  RFTLQGVNYADSELNLSFSVQKLSLAINPNCLLEPSICINELALSGVKL-DLPSLAESE 120
           +  L+G+  +D +    F   ++ L   P   L   + I+ L +    L  LP L  SE
Sbjct: 87  KAVLRGLVLSDPK-GRFFDAPRVELDWWPFAWLSNRLDIDRLVIPQATLHKLPKLNPSE 144



 Score = 27.3 bits (59), Expect = 0.010
 Identities = 52/175 (29%), Positives = 72/175 (41%), Gaps = 27/175 (15%)

Query: 257  VSISSLELSMPELDAQLNAQATLSQDYPIQLELRSQVHLADFKGQTLS--------LAAQ 308
            +S S L LS   +D  +NA  TL +     L  R  V +AD  GQT+         L + 
Sbjct: 914  LSRSGLSLSSRPVDVGVNAVLTLDR-----LATR-MVFVAD--GQTIGRGQALLTPLIST 965

Query: 309  GSLADLTVQANLDSLAQAQLNSHFNLLDADIPFDLQ-LSQVKAQWPMLGEGDYHVEVPEL 367
            GSL +    A L  +AQ + N       AD  + L  +  V    P+    D H  + + 
Sbjct: 966  GSLVERLNGAPL--IAQLRFNG-----TADTLWRLTGVEIVDIAGPVSVTADAHGTLADP 1018

Query: 368  SIQGSLAKYQFALQGALQGKDLPNVSLALQGHGNLDEVALQSLKVDTL-GGLVTG 421
             I GSLA    AL   + G  L NV    +  G   ++   S   +   GG VTG
Sbjct: 1019 VITGSLATDNAALNSPVTGMRLRNVKARARFAG--AQLVFSSFTANAQNGGSVTG 1071