Pairwise Alignments

Query, 451 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) from Variovorax sp. SCN45

 Score =  157 bits (396), Expect = 9e-43
 Identities = 132/469 (28%), Positives = 212/469 (45%), Gaps = 37/469 (7%)

Query: 2   HIHILGICGTFMGGVAMLARQLGHKVTGSDANVYPPMSTMLEAQGIEIIEGFDPVQLEPK 61
           HIH +GI G+ M G+A +   LG+K++GSD      +   L   GI    G     +E  
Sbjct: 7   HIHFVGIGGSGMSGIAEVLLNLGYKISGSDLADSATLRR-LAGLGIGTFVGHAAAHIEGA 65

Query: 62  PDLVVIGNAMSRGNPCVEYVLNHNLRYTSGPQWLQDFLLHDRWVIAVSGTHGKTTTSSMI 121
            D VV   A+   NP V       +        L + L+  +  IA++GTHGKTTT+S++
Sbjct: 66  -DAVVTSTAVQPDNPEVLAAREKRIPVVPRALMLAE-LMRLKQGIAIAGTHGKTTTTSLV 123

Query: 122 AWVLEHCGYQPGFLVGGVLGNFGISARLGESMFFVVEADEYDSAFFDKRSKFVHYHPRTL 181
           A VL   G  P F++GG L + G +A+LG   + VVEADE D++       F++  P   
Sbjct: 124 ASVLAAAGLDPTFVIGGRLNSAGANAQLGSGDYIVVEADESDAS-------FLNLLPVMA 176

Query: 182 VMNNLEFDHADIF-DNLEAIKRQFHHLVRTVPGNGRILAPKQDEALADVLQRGCWSETEF 240
           V+ N++ DH + +  +   +K+ F   +  +P  G  +    D A+ +++       T +
Sbjct: 177 VVTNIDADHMETYGHDFAKLKKAFVDFLHRMPFYGVAILCTDDPAVREIVSSVTCPVTSY 236

Query: 241 S-GEQGEWQAEKITADGSQFHVLLKGERVG------QVNWSLVGDHNVSNALMAIAAARH 293
             GE  + +A  + A G Q H   +  R G       +  +L G+HNV NAL  IA A  
Sbjct: 237 GFGEDAQVRALDVRAVGGQMHFTAQ-RRNGVTLPDLPIVLNLPGEHNVRNALSVIAVAVE 295

Query: 294 VGVAPELACEALGLFVNTKRRLELKGEI-------NGVTVYDDFAHHPTAIELTLGGLRN 346
           +G+  E     L  F    RR +  G++          TV DD+ HHP  +  T+   R 
Sbjct: 296 LGIPDEAVQRGLAGFKGVGRRFQSYGDVAVQGGDAGTFTVIDDYGHHPVEMAATIAAARG 355

Query: 347 KVGDKKIIAVLEPRSATMKLGVHKETLAASLHSADSVYL---YQPSNIPWSVEE---VAK 400
              D++++   +P   T       E     + +AD+V L   Y     P    +   +A+
Sbjct: 356 AFPDRRLVLAFQPHRYTRTRDCF-EDFVKVIGTADAVLLGEVYAAGEAPIVAADGRTLAR 414

Query: 401 QCQQPAQVS-ANMDEFVAM---IAKEAQAGDQILVMSNGGFEGIHGKLL 445
             +   +V    +D+  AM   I   A+ GD +L M  G    +  K++
Sbjct: 415 ALRVAGKVEPVFVDDIAAMPQAILDNARPGDVVLSMGAGSIGAVPAKVV 463