Pairwise Alignments

Query, 451 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase (EC 6.3.2.-) from Variovorax sp. SCN45

 Score =  491 bits (1265), Expect = e-143
 Identities = 260/466 (55%), Positives = 317/466 (68%), Gaps = 21/466 (4%)

Query: 1   MHIHILGICGTFMGGVAMLARQLGHKVTGSDANVYPPMSTMLEAQGIEIIEGFDPVQLEP 60
           MHIHILGICGTFMGG+A LAR+ GH+VTG DA VYPPMS  L + GI++IEGF   QL+ 
Sbjct: 1   MHIHILGICGTFMGGLAALAREAGHRVTGCDAGVYPPMSDQLRSLGIDLIEGFGAEQLKL 60

Query: 61  KPDLVVIGNAMSRGN--------PCVEYVLNHNLRYTSGPQWLQDFLLHDRWVIAVSGTH 112
            PD+ VIGN +SR          P +E +L+    YTSGPQWL + +L  R V+AV+GTH
Sbjct: 61  SPDMFVIGNVVSRARLPDGSPKFPLMEAILDAGKPYTSGPQWLAEHVLQGRHVLAVAGTH 120

Query: 113 GKTTTSSMIAWVLEHCGYQPGFLVGGVLGNFGISARLGESMFFVVEADEYDSAFFDKRSK 172
           GKTTT+SM+AWVLE  G  PGFLVGGV  +FG+SARLG+   FV+EADEYD+AFFDKRSK
Sbjct: 121 GKTTTTSMLAWVLEKGGKAPGFLVGGVPLDFGVSARLGDGTAFVIEADEYDTAFFDKRSK 180

Query: 173 FVHYHPRTLVMNNLEFDHADIFDNLEAIKRQFHHLVRTVPGNGRILAPKQDEALADVLQR 232
           FVHY PRT V+NNLEFDHADIFD+L AI+RQFHHLVRTVP  GR++    +E+L  VL +
Sbjct: 181 FVHYRPRTAVLNNLEFDHADIFDDLAAIERQFHHLVRTVPSTGRLVVNATEESLRHVLSQ 240

Query: 233 GCWSETEFSGEQGEWQAEKITADGSQFHVLLKGERVGQVNWSLVGDHNVSNALMAIAAAR 292
           GCWSE    G  GEWQA         F VL +GE +G+V W L G HN  NAL AIAAA 
Sbjct: 241 GCWSELARFGAGGEWQAR---GSHDAFDVLRQGEVIGRVEWELSGLHNQMNALAAIAAAD 297

Query: 293 HVGVAPELACEALGLFVNTKRRLELKGEI----NGVTVYDDFAHHPTAIELTLGGLRNKV 348
           HVGV P  A  ALG F N +RR+EL+G +      +TVYDDFAHHPTAI  TL GLRNK+
Sbjct: 298 HVGVPPAEAARALGSFRNVRRRMELRGTVERSGGSITVYDDFAHHPTAIRTTLDGLRNKL 357

Query: 349 G-----DKKIIAVLEPRSATMKLGVHKETLAASLHSADSVYLYQPSNIPWSVEEVAKQCQ 403
                  ++I+A  EPRS TMKLGV    L  SL +AD  + +  + + W V        
Sbjct: 358 DAAGKKSERILAAFEPRSNTMKLGVMAAQLPWSLEAADLSFCH-TAGLDWDVAAALAPMG 416

Query: 404 QPAQVSANMDEFVAMIAKEAQAGDQILVMSNGGFEGIHGKLLAALQ 449
           + AQ++  ++  V  I   A+ GD I+ MSNGGF G+H KLLAAL+
Sbjct: 417 ERAQLAGAIEPLVNQIVAAARPGDHIVCMSNGGFGGVHDKLLAALK 462