Pairwise Alignments

Query, 451 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) from Sphingobium sp. HT1-2

 Score =  167 bits (423), Expect = 7e-46
 Identities = 142/479 (29%), Positives = 222/479 (46%), Gaps = 49/479 (10%)

Query: 3   IHILGICGTFMGGVAMLARQLGHKVTGSD-ANVYPPMSTMLEAQGIEIIEGFDPVQLEPK 61
           IH +GI G  M G+A +   LG+KV GSD A  Y  +   L A+GI+++ G     L   
Sbjct: 11  IHFIGIGGIGMSGIAEVMHNLGYKVQGSDVAEGY--VVEGLRAKGIKVMIGHKAENLGDA 68

Query: 62  PDLVVIGNAMSRGNPCVEYVLNHNLRYTSGPQWLQDFLLHDRWVIAVSGTHGKTTTSSMI 121
             +VV   A+ RGNP VE  L + +      + L + L+  +  +A++GTHGKTTT+SM+
Sbjct: 69  A-VVVTSTAIKRGNPEVELALENRVPVIRRAEMLAE-LMRLKSTVAIAGTHGKTTTTSMV 126

Query: 122 AWVLEHCGYQPGFLVGGVLGNFGISARLGESMFFVVEADEYDSAFFDKRSKFVHYHPRTL 181
           A +L+  G  P  + GG++ ++G +ARLG S + VVEADE D +       F+       
Sbjct: 127 AALLDAGGVDPTVINGGIINSYGSNARLGNSDWMVVEADESDGS-------FLRLDGTIA 179

Query: 182 VMNNLEFDHADIFDNLEAIKRQFHHLVRTVPGNGRILAPKQDEALADVLQR--------- 232
           V+ N++ +H D + + +A+K  F   V  VP  G  +       +  +L R         
Sbjct: 180 VVTNIDPEHLDHYGSFDAVKDAFVEFVENVPFYGAAMLCLDHPEVQAILPRVQDRRIVTY 239

Query: 233 GCWSETEFSGEQGEWQAEKITADGSQFHVLLK-----GERVGQVNWSLVGDHNVSNALMA 287
           G  ++ +  GE       +    G++F V ++       R+  +   + G HNV NA+ A
Sbjct: 240 GFSAQADIRGEN-----VQPVPGGNRFDVQIRERDGATRRIEGIELPMPGRHNVLNAMAA 294

Query: 288 IAAARHVGVAPELACEALGLFVNTKRRLELKGEING----VTVYDDFAHHPTAIELTLGG 343
           I  A  +G+           F   KRR    GEI       TV DD+ HHP  I+  L  
Sbjct: 295 IGVALQMGIDDATIQTGFAKFGGVKRRFTKVGEIPAGAGVATVIDDYGHHPVEIKAVLAA 354

Query: 344 LRNKVGDK-KIIAVLEPRSATMKLGVHKETLAASLHSADSVY---LYQPSNIPWS----- 394
            R   G K ++IAV++P   T +L    +    + + AD VY   +Y     P       
Sbjct: 355 ARE--GAKGRVIAVVQPHRFT-RLRDLMDDFQQAFNDADIVYAAPVYTAGEQPIEDVDSA 411

Query: 395 --VEEVAKQCQQPAQVSANMDEFVAMIAKEAQAGDQILVMSNGGFEGIHGKLLAALQQK 451
             V  + ++  + A   A+ D+   +IA + QA D I+ +  G        L AA+  K
Sbjct: 412 ALVAGLKRRGHRNAATVADADDLARVIAADVQADDMIICLGAGDITKWAAGLSAAVTAK 470