Pairwise Alignments

Query, 451 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  490 bits (1261), Expect = e-143
 Identities = 255/464 (54%), Positives = 312/464 (67%), Gaps = 21/464 (4%)

Query: 1   MHIHILGICGTFMGGVAMLARQLGHKVTGSDANVYPPMSTMLEAQGIEIIEGFDPVQLEP 60
           MHIHILGICGTFMGGVA LAR+ GH+VTG DA VYPPMS  L A GI++IEGF   QL  
Sbjct: 1   MHIHILGICGTFMGGVAALAREAGHRVTGCDAGVYPPMSDQLRALGIDLIEGFGADQLAL 60

Query: 61  KPDLVVIGNAMSRGN--------PCVEYVLNHNLRYTSGPQWLQDFLLHDRWVIAVSGTH 112
           +PD+ V+GN +SR          P +E +++    YTSGPQWL + +L  R V+AV+GTH
Sbjct: 61  RPDMFVVGNVVSRARLADGTPKFPLMEAIMDSGAAYTSGPQWLAEHVLQGRHVMAVAGTH 120

Query: 113 GKTTTSSMIAWVLEHCGYQPGFLVGGVLGNFGISARLGESMFFVVEADEYDSAFFDKRSK 172
           GKTTT+ M+ W+LE  G QPGFL+GGV  NFG+SARLG+   F +EADEYD+AFFDKRSK
Sbjct: 121 GKTTTTGMLTWILEANGLQPGFLIGGVPMNFGVSARLGQGQTFTIEADEYDTAFFDKRSK 180

Query: 173 FVHYHPRTLVMNNLEFDHADIFDNLEAIKRQFHHLVRTVPGNGRILAPKQDEALADVLQR 232
           FVHY PRT ++NNLEFDHADIFD+L AI+RQFHHL+RTVPGNGR++    +E+L  VL +
Sbjct: 181 FVHYRPRTAILNNLEFDHADIFDDLAAIERQFHHLIRTVPGNGRVVVNGLEESLERVLHK 240

Query: 233 GCWSETEFSGEQGEWQAEKITADGS--QFHVLLKGERVGQVNWSLVGDHNVSNALMAIAA 290
           G WSE    G          TA G    F VL +G+  G+V W+L G HN  N L AIAA
Sbjct: 241 GLWSELRSFGA----AVSDFTAQGEPHAFDVLHQGQPAGRVEWALTGVHNQLNGLAAIAA 296

Query: 291 ARHVGVAPELACEALGLFVNTKRRLELKGEI----NGVTVYDDFAHHPTAIELTLGGLRN 346
           A HVGVAP  A  AL  F N +RR+E++G +      +TVYDDFAHHPTAI  TL GL+ 
Sbjct: 297 AEHVGVAPADAARALSNFENVRRRMEVRGTVPRAGGAITVYDDFAHHPTAIRTTLDGLQR 356

Query: 347 KVGDK--KIIAVLEPRSATMKLGVHKETLAASLHSADSVYLYQPSNIPWSVEEVAKQCQQ 404
           K+G    +I+AV EPRS TMKLG  K  L  SL +AD  + +    + W   E       
Sbjct: 357 KLGQPRGRILAVFEPRSNTMKLGTMKSQLPWSLEAADLAFCHS-GGLDWDAAEALAPMGA 415

Query: 405 PAQVSANMDEFVAMIAKEAQAGDQILVMSNGGFEGIHGKLLAAL 448
            AQV  N+DE VA +   AQAGD I+ MSNGGF G+H +LL AL
Sbjct: 416 RAQVGRNIDELVAQVTAAAQAGDHIVCMSNGGFGGVHDRLLKAL 459