Pairwise Alignments

Query, 451 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  152 bits (384), Expect = 2e-41
 Identities = 133/473 (28%), Positives = 213/473 (45%), Gaps = 39/473 (8%)

Query: 2   HIHILGICGTFMGGVAMLARQLGHKVTGSDANVYPPMSTMLEAQGIEIIEGFDPVQLEPK 61
           HIH +GI G  M G+A +    G++++GSD      ++  L A G ++  G D   +E  
Sbjct: 7   HIHFVGIGGAGMSGIAEVLLNQGYRISGSDLGE-STVTRRLVALGAQVFVGHDAANIEGA 65

Query: 62  PDLVVIGNAMSRGNPCVEYVLNHNLRYTSGPQWLQ-DFLLHDRWVIAVSGTHGKTTTSSM 120
            D +V   A+   NP  E V  H       P+ +    L+  +  +A++GTHGKTTT+S+
Sbjct: 66  -DAIVTSTAVKPDNP--EVVAAHAKLVPVVPRAVMLAELMRMKKGVAIAGTHGKTTTTSL 122

Query: 121 IAWVLEHCGYQPGFLVGGVLGNFGISARLGESMFFVVEADEYDSAFFDKRSKFVHYHPRT 180
           +A VL      P F++GG L + G +A+LG   + VVEADE D++       F++  P  
Sbjct: 123 VASVLAAAQLDPTFVIGGRLNSAGANAQLGSGEYIVVEADESDAS-------FLNLLPVL 175

Query: 181 LVMNNLEFDHADIF-DNLEAIKRQFHHLVRTVPGNGRILAPKQDEALADVLQRGCWSETE 239
            V+ N++ DH D +  +   +K  F   +  +P  G  +    D A+ ++L +     T 
Sbjct: 176 SVVTNIDADHMDTYGHDFGNLKAAFVDFLHKMPFYGAAVVCVDDAAIREILPQIARPITS 235

Query: 240 FS-GEQGEWQAEKITADGSQFHVLLKGERVG------QVNWSLVGDHNVSNALMAIAAAR 292
           +   E  + +A  + A  +Q H  ++  R G       V  +L G+HNV NAL AI  A 
Sbjct: 236 YGFSEDAQVRAINVRAVDTQMHFTVQ-RRNGVELPDLDVVLNLPGNHNVLNALAAIGIAV 294

Query: 293 HVGVAPELACEALGLFVNTKRRLELKGEI-----NGVTVYDDFAHHPTAIELTLGGLRNK 347
            + V  E    AL  F    RR +  GE         TV DD+ HHP  +  TL   R  
Sbjct: 295 ELNVPDEAVQRALAEFKGVGRRFQRYGEAALPSGGTCTVVDDYGHHPVEMAATLSAARGA 354

Query: 348 VGDKKIIAVLEPRSATMKLGVHKETLAASLHSADSVYL---YQPSNIPWSVEEVAKQCQQ 404
              ++++   +P   T       E     +  AD+V L   Y     P  V    +   +
Sbjct: 355 YPGRRLVLAFQPHRYTRTRDCF-EDFVKVIGQADAVLLAEVYAAGEAP-IVAADGRSLAR 412

Query: 405 PAQVSANM-----DEFVAM---IAKEAQAGDQILVMSNGGFEGIHGKLLAALQ 449
             +V+  +     D+  AM   +   A+ GD +L M  G    + G+++   Q
Sbjct: 413 ALRVAGKLEPVFVDDIAAMPQAVLDNARDGDVVLCMGAGTVGAVAGRVIELAQ 465