Pairwise Alignments

Query, 451 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., UDP-N-acetylmuramate--L-alanine ligase from Magnetospirillum magneticum AMB-1

 Score =  151 bits (381), Expect = 5e-41
 Identities = 119/370 (32%), Positives = 180/370 (48%), Gaps = 27/370 (7%)

Query: 3   IHILGICGTFMGGVAMLARQLGHKVTGSD-ANVYPPMSTMLEAQGIEIIEGFDPVQLEPK 61
           IH +GI G  M G+A +   LG+ V G+D A+ Y      L   GI +  G     L   
Sbjct: 11  IHFVGIGGIGMSGIAEILHNLGYSVQGTDIADNYNV--ERLRKMGIRVHIGHAAEALGDA 68

Query: 62  PDLVVIGNAMSRGNPCVEYVLNHNLRYTSGPQWLQDFLLHDRWVIAVSGTHGKTTTSSMI 121
             +VV+ +A+   NP V+      +      + L + L+  +  IA+ GTHGKTTT+S+I
Sbjct: 69  R-VVVVSSAVKADNPEVQAARAKLVPVVRRAEMLAE-LMRLKSAIAIGGTHGKTTTTSLI 126

Query: 122 AWVLEHCGYQPGFLVGGVLGNFGISARLGESMFFVVEADEYDSAFFDKRSKFVHYHPRTL 181
           A +L+     P  + GG++  +G +ARLG S + VVEADE D +F    S  V       
Sbjct: 127 AALLDTARLDPTVINGGIINAYGTNARLGASEWMVVEADESDGSFIKLPSTAV------- 179

Query: 182 VMNNLEFDHADIFDNLEAIKRQFHHLVRTVPGNG----RILAPKQDEALADVLQRGCWSE 237
           V+ N++ +H D +  +E +   F   V  +P  G     I  P+    +A V  R     
Sbjct: 180 VVTNIDPEHMDHYGTVERLHEAFRTFVENIPFYGFAAMCIDHPEVQALVARVPDRKL--V 237

Query: 238 TEFSGEQGEWQAEKITAD--GSQFHVLLKGERVG------QVNWSLVGDHNVSNALMAIA 289
           T     Q   + EK++ D  G+++ V++     G       ++  + G+HNV N+L AIA
Sbjct: 238 TYGFNHQALVRVEKLSMDITGARYDVVITDRVTGATRTIADIHLPMYGEHNVLNSLAAIA 297

Query: 290 AARHVGVAPELACEALGLFVNTKRRLELKGEINGVTVYDDFAHHPTAIELTLGGLRNKVG 349
            A  +G+  ++   ALG F   KRR    GE  GVTV DD+ HHP  I   L   R+   
Sbjct: 298 VANELGLPNDVVKTALGGFKGVKRRFTRTGEAKGVTVIDDYGHHPVEIAAVLKAARSAC- 356

Query: 350 DKKIIAVLEP 359
              +IAV++P
Sbjct: 357 QGNVIAVVQP 366