Pairwise Alignments

Query, 451 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., UDP-N-acetylmuramate--alanine ligase from Magnetospirillum magneticum AMB-1

 Score =  135 bits (339), Expect = 4e-36
 Identities = 113/365 (30%), Positives = 161/365 (44%), Gaps = 26/365 (7%)

Query: 7   GICGTFMGGVAMLARQLGHKVTGSDANV----YPPMSTMLEAQGIEIIEGFDPVQLEPKP 62
           GI G+ M  +A++    GHKV GSD ++      P    L+  GI +    D   +    
Sbjct: 11  GIGGSGMLPLALIVHARGHKVAGSDRSLDQGRLAPKFEYLQGLGIRLFPQ-DGSGITDPA 69

Query: 63  DLVVIGNAMSRGNPCVEYVLNHNLRYTSGPQWLQDFLLHDRWVIAVSGTHGKTTTSSMIA 122
            ++V   A+    P V           + PQ L          I ++GT GK+TT+ M+ 
Sbjct: 70  QVLVTSAAVEDTVPDVVAARALKAPMLTRPQLLARLFNASELPIGIAGTSGKSTTTGMLG 129

Query: 123 WVLEHCGYQPGFLVGGVLGNFG------ISARLGESMFFVVEADEYDSAFFDKRSKFVHY 176
           W+LE CG +P  + G V+ NF        SA +G+   FV E DE D +         +Y
Sbjct: 130 WILERCGRRPTVMNGAVMKNFVRPDSPFSSALVGDGPAFVAEVDESDGSI-------ANY 182

Query: 177 HPRTLVMNNLEFDHADIFDNLEAIKRQFHHLVRTVPGNGRILAPKQDEALADVLQRGCWS 236
            PR  ++NN+  DH  + D L  +   F    R    N   L   +  ALA  L      
Sbjct: 183 APRIALVNNIALDHKSM-DELRRLFADFTAKARVAVLN---LDNGETAALAATLPADRVV 238

Query: 237 ETEFSGEQGEWQAEKITA--DGSQFHVLLKGERVGQVNWSLVGDHNVSNALMAIAAARHV 294
                    +  AE ++   DG  F    +  +   V   + G HNVSNAL A+A A   
Sbjct: 239 TYSLEDPGADLWAENVSPAPDGIAFTARTRDGKTMPVKLLVPGRHNVSNALAALAGALAA 298

Query: 295 GVAPELACEALGLFVNTKRRLELKGEINGVTVYDDFAHHPTAIELTLGGLRNKVGDKKII 354
           G+  E A  ALG F   +RRLE  G   GVTV DDFAH+P  I  TL  L +  G  +++
Sbjct: 299 GLGLEDAATALGEFSGVRRRLETVGTKGGVTVIDDFAHNPDKISATLATLHDWPG--RLL 356

Query: 355 AVLEP 359
            + +P
Sbjct: 357 VMFQP 361