Pairwise Alignments

Query, 451 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  166 bits (420), Expect = 2e-45
 Identities = 118/377 (31%), Positives = 186/377 (49%), Gaps = 27/377 (7%)

Query: 2   HIHILGICGTFMGGVAMLARQLGHKVTGSDANVYPPMSTMLEAQGIEIIEGFDPVQLEPK 61
           HIH +GI G  MGG+A +    G++++GSD     P++  L + G  I     P  +   
Sbjct: 21  HIHFVGIGGAGMGGIAEVLANEGYQISGSDL-APNPVTQQLTSLGATIFFNHRPENVRDA 79

Query: 62  PDLVVIGNAMSRGNPCVEYVLNHNLRYT--SGPQWLQDFLLHDRWVIAVSGTHGKTTTSS 119
             +VV+ +A+S  NP  E V  H  R       + L + L+  R  IA++GTHGKTTT++
Sbjct: 80  -SVVVVSSAISADNP--EIVAAHEARIPVIRRAEMLAE-LMRFRHGIAIAGTHGKTTTTA 135

Query: 120 MIAWVLEHCGYQPGFLVGGVLGNFGISARLGESMFFVVEADEYDSAFFDKRSKFVHYHPR 179
           M++ +    G  P F+ GG++   G+ ARLG S + + EADE D++       F+H  P 
Sbjct: 136 MVSSIYAEAGLDPTFVNGGLVKAAGVHARLGHSRYLIAEADESDAS-------FLHLQPM 188

Query: 180 TLVMNNLEFDHADIF-DNLEAIKRQFHHLVRTVPGNGRILAPKQDEALADVLQR-GCWSE 237
             ++ N+E DH D +  + E +K+ F + +  +P  GR +    D  + ++L R G  + 
Sbjct: 189 VAIVTNIEADHMDTYHGDFENLKQTFINFLHNLPFYGRAVMCVDDPVIRELLPRVGRQTT 248

Query: 238 TEFSGEQGEWQAEKITADGSQFH--VLLKGERVGQVNWSLVGDHNVSNALMAIAAARHVG 295
           T    E  + + E     G Q H  +L +G     V  +  G HN  NA  A+A A   G
Sbjct: 249 TYGFSEDADVRVEDYQQIGPQGHFTLLRQGMPDLHVTLNAPGRHNALNAAAAVAVATEEG 308

Query: 296 VAPELACEALGLFVNTKRRLELKGE-----ING----VTVYDDFAHHPTAIELTLGGLRN 346
           +A +    AL  F  T RR +  GE     +NG      + DD+ HHPT ++ T+   R 
Sbjct: 309 IADDAILRALESFQGTGRRFDFLGEFPLEPVNGKAGTAMLVDDYGHHPTEVDATIKAARA 368

Query: 347 KVGDKKIIAVLEPRSAT 363
              DK ++ + +P   T
Sbjct: 369 GWPDKNLVMLFQPHRYT 385