Pairwise Alignments

Query, 451 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., UDP-N-acetylmuramate--L-alanine ligase (NCBI) from Escherichia coli BW25113

 Score =  162 bits (410), Expect = 2e-44
 Identities = 116/377 (30%), Positives = 184/377 (48%), Gaps = 27/377 (7%)

Query: 2   HIHILGICGTFMGGVAMLARQLGHKVTGSDANVYPPMSTMLEAQGIEIIEGFDPVQLEPK 61
           HIH +GI G  MGG+A +    G++++GSD     P++  L   G  I     P  +   
Sbjct: 21  HIHFVGIGGAGMGGIAEVLANEGYQISGSDL-APNPVTQQLMNLGATIYFNHRPENVRDA 79

Query: 62  PDLVVIGNAMSRGNPCVEYVLNHNLRYT--SGPQWLQDFLLHDRWVIAVSGTHGKTTTSS 119
             +VV+ +A+S  NP  E V  H  R       + L + L+  R  IA++GTHGKTTT++
Sbjct: 80  -SVVVVSSAISADNP--EIVAAHEARIPVIRRAEMLAE-LMRFRHGIAIAGTHGKTTTTA 135

Query: 120 MIAWVLEHCGYQPGFLVGGVLGNFGISARLGESMFFVVEADEYDSAFFDKRSKFVHYHPR 179
           M++ +    G  P F+ GG++   G+ ARLG   + + EADE D++       F+H  P 
Sbjct: 136 MVSSIYAEAGLDPTFVNGGLVKAAGVHARLGHGRYLIAEADESDAS-------FLHLQPM 188

Query: 180 TLVMNNLEFDHADIFD-NLEAIKRQFHHLVRTVPGNGRILAPKQDEALADVLQR-GCWSE 237
             ++ N+E DH D +  + E +K+ F + +  +P  GR +    D  + ++L R G  + 
Sbjct: 189 VAIVTNIEADHMDTYQGDFENLKQTFINFLHNLPFYGRAVMCVDDPVIRELLPRVGRQTT 248

Query: 238 TEFSGEQGEWQAEKITADGSQFH--VLLKGERVGQVNWSLVGDHNVSNALMAIAAARHVG 295
           T    E  + + E     G Q H  +L + +   +V  +  G HN  NA  A+A A   G
Sbjct: 249 TYGFSEDADVRVEDYQQIGPQGHFTLLRQDKEPMRVTLNAPGRHNALNAAAAVAVATEEG 308

Query: 296 VAPELACEALGLFVNTKRRLELKGE-----ING----VTVYDDFAHHPTAIELTLGGLRN 346
           +  E    AL  F  T RR +  GE     +NG      + DD+ HHPT ++ T+   R 
Sbjct: 309 IDDEAILRALESFQGTGRRFDFLGEFPLEPVNGKSGTAMLVDDYGHHPTEVDATIKAARA 368

Query: 347 KVGDKKIIAVLEPRSAT 363
              DK ++ + +P   T
Sbjct: 369 GWPDKNLVMLFQPHRFT 385