Pairwise Alignments

Query, 451 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Dickeya dianthicola ME23

 Score =  152 bits (385), Expect = 2e-41
 Identities = 127/475 (26%), Positives = 214/475 (45%), Gaps = 44/475 (9%)

Query: 2   HIHILGICGTFMGGVAMLARQLGHKVTGSDANVYPPMSTMLEAQGIEIIEGFDPVQLEPK 61
           HIH +GI G  MGG+A +    G++++GSD      ++  L   G  I     P  +  +
Sbjct: 21  HIHFVGIGGAGMGGIAEVLANEGYQISGSDL-APNAVTQQLTDLGARIYFHHRPENVN-E 78

Query: 62  PDLVVIGNAMSRGNPCVEYVLNHNLRYT--SGPQWLQDFLLHDRWVIAVSGTHGKTTTSS 119
             +VV+ +A++  NP  E +  H  R       + L + L+  R  IAV+GTHGKTTT++
Sbjct: 79  ASVVVVSSAIAADNP--EIIAAHEARIPVIRRAEMLAE-LMRFRHGIAVAGTHGKTTTTA 135

Query: 120 MIAWVLEHCGYQPGFLVGGVLGNFGISARLGESMFFVVEADEYDSAFFDKRSKFVHYHPR 179
           M+  +    G  P F+ GG++   G  ARLG S + + EADE D++       F+H  P 
Sbjct: 136 MVTSIYAEAGLDPTFVNGGLVKAAGTHARLGSSRYLIAEADESDAS-------FLHLQPM 188

Query: 180 TLVMNNLEFDHADIFD-NLEAIKRQFHHLVRTVPGNGRILAPKQDEALADVLQR-GCWSE 237
             ++ N+E DH D +  + E +K+ F + +  +P  G  +    D  + ++L + G    
Sbjct: 189 VAIVTNIEADHMDTYQGDFENLKQTFINFLHNLPFYGHAVMCLDDAVIRELLPKVGRHIT 248

Query: 238 TEFSGEQGEWQAEKITADGSQ--FHVLLKGERVGQVNWSLVGDHNVSNALMAIAAARHVG 295
           T    +  + +       G+Q  F +  +G+ +  V  +  G HN  NA  A+A A   G
Sbjct: 249 TYGFSDDADVRVADYRQIGAQGLFTLARQGKPLLNVTLNAPGRHNALNAAAAVAVATEEG 308

Query: 296 VAPELACEALGLFVNTKRRLELKGE-----ING----VTVYDDFAHHPTAIELTLGGLRN 346
           +  +    AL  F  T RR +  G+     +NG      + DD+ HHPT ++ T+   R 
Sbjct: 309 IDDDAILRALARFQGTGRRFDFLGDFPLQPVNGKSGSAMLVDDYGHHPTEVDATIKAARA 368

Query: 347 KVGDKKIIAVLEPRSATMKLGVHKETLAASLHSADSVYL---YQPSNIPWSVEEVAKQCQ 403
              DK+++ + +P   T    ++ +  A  L   D + +   Y     P    +    C+
Sbjct: 369 GWPDKRLVMIFQPHRYTRTRDLY-DDFAHVLSQVDVLLMLDVYSAGEAPIPGADSRSLCR 427

Query: 404 --------QPAQVSANMDEFVAMIAKEAQAGDQILVMSNGGFEGIHGKLLAALQQ 450
                    P  V  ++D    ++ +  Q  D +LV   G      GKL   L +
Sbjct: 428 TIRGRGKIDPIMV-PDVDTLPELLVQALQGDDLVLVQGAGNI----GKLARRLAE 477