Pairwise Alignments

Query, 451 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligase from Agrobacterium fabrum C58

 Score = 58.5 bits (140), Expect = 5e-13
 Identities = 74/266 (27%), Positives = 110/266 (41%), Gaps = 29/266 (10%)

Query: 105 VIAVSGTHGKTTTSSMIAWVLEHCGYQPGFL-VGGVLG----NFG---------ISARLG 150
           ++AV+GT GKT+ +S +  +    G+    +   GV+     ++G         + A L 
Sbjct: 105 MVAVTGTAGKTSVASFVRQIWAFAGHAAAQIGTTGVIAPGREDYGALTTPDPVTLHALLA 164

Query: 151 E--SMFFVVEADEYDSAFFDKRSKFVHYHPRTLVMNNLEFDHADIFDNLEAIKRQFHHLV 208
           E  S      A E  S   D+R +    H       NL  DH D    +E        L 
Sbjct: 165 ELASEGVTHAAMEASSHGLDQR-RLDGVHLSAAGFTNLGRDHMDYHPTIEDYMAAKMRLF 223

Query: 209 RTVPGNGR---ILA--PKQDEALADVLQRGCWSETEFSGEQGEWQAEKITADGSQFHVLL 263
            T+   G    I A  P  D+A+    + G   E    G  G++   K   +  +   ++
Sbjct: 224 DTLMEKGAPAVIFADDPWSDKAIGAAREAGL--EVRTVGRNGQYLTLK-RVEHFRHKQMI 280

Query: 264 KGERVG---QVNWSLVGDHNVSNALMAIAAARHVGVAPELACEALGLFVNTKRRLELKGE 320
           +    G   +V+  L GD  V+NAL+A   A   GV    A +AL   V    RLEL G+
Sbjct: 281 EVHHDGVIFEVDIPLAGDFQVANALVAAGLAMSTGVPAATALKALEKLVGAAGRLELVGQ 340

Query: 321 I-NGVTVYDDFAHHPTAIELTLGGLR 345
             NG   Y D+AH P A+E  L  +R
Sbjct: 341 TKNGALAYVDYAHKPDALENVLTSVR 366