Pairwise Alignments

Query, 451 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., UDP-N-acetylmuramate-alanine ligase from Agrobacterium fabrum C58

 Score =  170 bits (430), Expect = 1e-46
 Identities = 135/459 (29%), Positives = 214/459 (46%), Gaps = 44/459 (9%)

Query: 3   IHILGICGTFMGGVAMLARQLGHKVTGSD----ANVYPPMSTMLEAQGIEIIEGFDPVQL 58
           +H +GI G  M G+A +   LGH+V GSD    ANV       L  +GIE+  G     L
Sbjct: 10  VHFIGIGGIGMSGIAEVLHNLGHRVQGSDQADSANVQ-----RLRDKGIEVFVGHTADNL 64

Query: 59  EPKPDLVVIGNAMSRGNPCVEYVLNHNLRYTSGPQWLQDFLLHDRWVIAVSGTHGKTTTS 118
               ++VV+  A+ + NP +      +L      + L + L+  R  IA+ GTHGKTTT+
Sbjct: 65  GDA-EVVVVSTAIKKNNPELIAAREKHLPIVRRAEMLAE-LMRFRNAIAIGGTHGKTTTT 122

Query: 119 SMIAWVLEHCGYQPGFLVGGVLGNFGISARLGESMFFVVEADEYDSAFFDKRSKFVHYHP 178
           SM+A +LE     P  + GG++  +G +AR+GE  + VVEADE D  F    +       
Sbjct: 123 SMVATLLEAGNLDPTVINGGIINAYGTNARMGEGEWMVVEADESDGTFLKLPAD------ 176

Query: 179 RTLVMNNLEFDHADIFDNLEAIKRQFHHLVRTVPGNG----RILAPKQDEALADVLQRGC 234
              V+ N++ +H D + N +A++  F   V  VP  G     +  P+    +  +  R  
Sbjct: 177 -VAVITNIDPEHLDHYGNFDAVRAAFRQFVENVPFYGFGVMCLDHPEVQALVGRIEDRKV 235

Query: 235 WSETEFSGEQGEWQAEKITADGSQ--FHVLLKGERVGQV------NWSLVGDHNVSNALM 286
            +  E    Q + +   +  DG++  F V ++  R G++         + G HNVSNA  
Sbjct: 236 ITYGE--NPQADVRFSNVRIDGTRSIFDVEIRRRRTGKIFSFKDLVLPMPGRHNVSNATA 293

Query: 287 AIAAARHVGVAPELACEALGLFVNTKRRLELKGEINGVTVYDDFAHHPTAIELTLGGLRN 346
           AIA A  +G++     + L  F   KRR  L GE NGV V+DD+ HHP  I+  L   R 
Sbjct: 294 AIAVANRLGISEADIKKGLASFAGVKRRFTLTGEANGVQVFDDYGHHPVEIKAVLAAAR- 352

Query: 347 KVGDKKIIAVLEPRSATMKLGVHKETLAASLHSADSVYL---YQPSNIPWS-------VE 396
           +    +IIAV +P   + +L    +  A   + AD++ L   Y     P         V 
Sbjct: 353 EACKGRIIAVHQPHRYS-RLSSLFDDFAHCFNDADTILLAPVYAAGEDPIEGASSEALVS 411

Query: 397 EVAKQCQQPAQVSANMDEFVAMIAKEAQAGDQILVMSNG 435
            +     + A+     ++  + +A  A  GD ++++  G
Sbjct: 412 AIKAAGHRDARFLEKREDLASQVAAIANPGDFVVLLGAG 450