Pairwise Alignments

Query, 330 a.a., thiamine ABC transporter substrate binding subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 53.9 bits (128), Expect = 6e-12
 Identities = 70/291 (24%), Positives = 122/291 (41%), Gaps = 22/291 (7%)

Query: 1   MKFQLTAVALATLCVASAASAAPTLTVYTYDSFAAEWGPAPAIEKAFEAQCGCDLQFVAL 60
           MK  +  + L+ +  +S   A  TL VY +  +  E        KAFE Q G  + +   
Sbjct: 1   MKTFIKGLVLSAVVASSQVYAEQTLNVYAWGGYLPEKSL-----KAFEQQEGVTINYSTF 55

Query: 61  DDGVSILNRLRLEGSNSKADVVLGLDNNLIEEAKQTGLLAT---HSVDTSKVTLPNGWS- 116
           ++  S+  +L+L    +  DVV       IE+  + GLLA    + +   K  +P     
Sbjct: 56  ENNESMYTKLKLL-KGTGYDVVFA-SAYFIEKMGREGLLAEIDHNQIPNMKDAMPTVLGL 113

Query: 117 ----DNTF-VPYDYGYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLL 171
                N F +PY +G     YN   L N  T   +L +K+ + +V+  D      G  L 
Sbjct: 114 AHDPQNKFSLPYIWGITGLYYNSSTLPNGITKWADLWDKQYEQQVMLIDDIRDVFGMALK 173

Query: 172 L---WMKSVYGDQAPQAWKQLASKTVTVTKGWSEA-YSMFLGGEADLVLSYTTSPAYHLI 227
           L    + +   ++  +A++ L +    V    S+A +  ++ GEA L + +  +     +
Sbjct: 174 LNGFSINTKNEEEIKKAYESLVALKKNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQV 233

Query: 228 AENDARFATANFSEGHYLQVEVAAKVKSTKNGELADKFLQFILSNEFQSVI 278
              + +F      EG  L ++       +KN  LA KF+ F+   E Q+ I
Sbjct: 234 EMPELKFVMP--EEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEI 282