Pairwise Alignments

Query, 330 a.a., thiamine ABC transporter substrate binding subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., Thiamine-binding periplasmic protein from Escherichia fergusonii Becca

 Score =  438 bits (1127), Expect = e-128
 Identities = 209/320 (65%), Positives = 249/320 (77%), Gaps = 1/320 (0%)

Query: 10  LATLCVASAASAAPTLTVYTYDSFAAEWGPAPAIEKAFEAQCGCDLQFVALDDGVSILNR 69
           L  LC A    A P LTVYTYDSFAA+WGP P ++KAFEA C C+L+ VAL+DGVS+LNR
Sbjct: 8   LLLLCTAPVF-AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNR 66

Query: 70  LRLEGSNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYDYGYFA 129
           LR+EG NSKADVVLGLDNNL++ A +TGL A   V    V +P GW+++TFVP+DYGYFA
Sbjct: 67  LRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVAAEAVNVPGGWNNDTFVPFDYGYFA 126

Query: 130 FVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQAWKQL 189
           FVY+K KL NPP SLKELVE   + +VIY+DPRTSTPG GLLLWM+ VYGD APQAW++L
Sbjct: 127 FVYDKNKLKNPPQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKL 186

Query: 190 ASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHYLQVEV 249
           A KTVTVTKGWSEAY +FL GE+DLVLSYTTSPAYH++ E    +A  NFSEGHYLQVEV
Sbjct: 187 AKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAATNFSEGHYLQVEV 246

Query: 250 AAKVKSTKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQSLSFS 309
           AA+  ++K  ELA KFLQF++S  FQ+ IPTGNWMYPV  V LP GF+ L  P  +L F+
Sbjct: 247 AARTAASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFT 306

Query: 310 AQEVAQMRKPWIREWQQALS 329
             EVA  R+ WI EWQ+A+S
Sbjct: 307 PAEVAAQRQAWISEWQRAVS 326