Pairwise Alignments

Query, 330 a.a., thiamine ABC transporter substrate binding subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

 Score = 46.2 bits (108), Expect = 1e-09
 Identities = 73/291 (25%), Positives = 111/291 (38%), Gaps = 45/291 (15%)

Query: 8   VALATLCVASAASAAPTLTVYTYDSFAAEWGPAPAIEKAFEAQCGCDLQFVALDDGVSIL 67
           VA AT  +ASAA A    TV  Y   AA       +   FE + G  ++ V    G  ++
Sbjct: 12  VAGATF-LASAAFAHAEGTVVVYS--AAPQQLMDELLPLFEKKTGTKVELVKAGSG-ELM 67

Query: 68  NRLRLEGSNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYDYGY 127
           NR++ E   +  DV+  +D  +I+ +    L   +    +    P       +VP+    
Sbjct: 68  NRIKAETGKAAGDVIWSVDGTVIDFSAD--LFEPYKPVEAASINPAFSPSTNWVPFTAVV 125

Query: 128 FAFVYNKEKL--ANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQA 185
            AF+ NKE L  A  PTS  +L +                  +GL+    S   DQ+  A
Sbjct: 126 TAFIVNKEALKGAPVPTSWADLAKPEY---------------KGLI---SSARADQSGSA 167

Query: 186 WKQLASKTV---TVTKGWSEAYSMFLGG---------------EADLVLSYTTSPAYHLI 227
           + Q+A+      +  KGW E Y+  LG                + +  +  T   A    
Sbjct: 168 YIQMATVLQDFDSEEKGW-EIYTGILGNSVLSTSSGAVPRFVNDGEQAVGITLEDAALRY 226

Query: 228 AENDARFATANFSEGHYLQVEVAAKVKSTKNGELADKFLQFILSNEFQSVI 278
               A        EG  +  +  A VK   N E    F+ FI+S E Q V+
Sbjct: 227 KLGSAPVEIVYPKEGTAIAPDGMALVKGGPNSENGKAFIDFIVSKEAQEVV 277