Pairwise Alignments

Query, 330 a.a., thiamine ABC transporter substrate binding subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., ABC transporter, substrate binding protein (thiamine) from Agrobacterium fabrum C58

 Score =  367 bits (942), Expect = e-106
 Identities = 177/329 (53%), Positives = 231/329 (70%), Gaps = 4/329 (1%)

Query: 5   LTAVALATLCVASAASAA--PTLTVYTYDSFAAEWGPAPAIEKAFEAQCGCDLQFVALDD 62
           L +V  A+L +   A+A   P LTVYTY+SF +EWGP P +++AFE  C C + FV + D
Sbjct: 7   LNSVIAASLFLPGLAAAQDKPELTVYTYESFVSEWGPGPKVKEAFEKVCVCTVNFVGVAD 66

Query: 63  GVSILNRLRLEGSNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVP 122
           GV++LNRL+LEGS SKADVV+GLD NL+ EAKQTGL     +D S   +P G+ D+ FVP
Sbjct: 67  GVALLNRLKLEGSGSKADVVVGLDTNLVAEAKQTGLFDASGIDASAAKVPGGYKDDVFVP 126

Query: 123 YDYGYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQA 182
           YDYG+FA +Y+ + + NPP SLKELVE     K+  QDPRTSTPG GLLLW+KSVYGD+A
Sbjct: 127 YDYGHFAVIYDTQAVKNPPASLKELVEGDSAQKIAIQDPRTSTPGLGLLLWVKSVYGDKA 186

Query: 183 PQAWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEG 242
           P+AW +L  + +TVT GWSE+Y +F  GE  +VLSYTTSPAYH++AE   R+  A FSEG
Sbjct: 187 PEAWAKLRKRILTVTPGWSESYGLFTKGEVPMVLSYTTSPAYHMVAEKSDRYQAAAFSEG 246

Query: 243 HYLQVEVAAKVKSTKNGELADKFLQFILSNEFQSVIPTGNWMYPV--TAVELPKGFDTLA 300
           HY+Q+EV+  +K+  + ELA +FL F L++ FQ  IP  NWM PV  T+  LP+ F  L 
Sbjct: 247 HYIQIEVSGLLKNAPHKELAKQFLAFTLTSGFQDAIPENNWMMPVAATSAPLPEAFSKLV 306

Query: 301 VPTQSLSFSAQEVAQMRKPWIREWQQALS 329
           VP ++     +EVA+ RK WI EW  A+S
Sbjct: 307 VPQKTFLMDPEEVAKNRKAWIDEWLSAMS 335