Pairwise Alignments

Query, 330 a.a., thiamine ABC transporter substrate binding subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 354 a.a., ABC transporter, substrate binding protein (iron) from Agrobacterium fabrum C58

 Score = 47.0 bits (110), Expect = 7e-10
 Identities = 77/310 (24%), Positives = 128/310 (41%), Gaps = 34/310 (10%)

Query: 10  LATLCVASAASAAPTLTVYTYDSFAAEWGPAPAIEKAFEAQCGCDLQFVALDDGVSILNR 69
           L  L +A AA A   + VY+Y          P ++ AF  + G +   + LD G  ++ R
Sbjct: 21  LTILSLAPAALAEGEVNVYSYRQPELI---QPLLD-AFTKETGIETNVLFLDKG--LVER 74

Query: 70  LRLEGSNSKADVVLGLDNNLIEEAKQTGLLATHSVD-TSKVTLPNGWSD---NTFVPYDY 125
           ++ EG NS ADV+L +D   + EAK+  +      D   +  +P    D     F     
Sbjct: 75  IQAEGVNSPADVLLTVDIARLVEAKEGKVTQPVLADPVIEKDIPANLRDPEGEWFGLTTR 134

Query: 126 GYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQA 185
           G   +  +KE++     + +EL + +   K+  +D + S     L+  M + +G    + 
Sbjct: 135 GRVVYA-SKERVTQKDITYEELADPKWKGKICIRDGQHSY-NIALIASMIAHHGVDYTRT 192

Query: 186 W-----KQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAEND--------- 231
           W       LA K     +  S+A S+F  GE D+ L  T      L  + +         
Sbjct: 193 WLTGLKNNLARKPDGTDR--SQAKSIF-SGECDIALGNTYYVGLMLTNDQEPDEKIWAGS 249

Query: 232 ARFATANFSE-GHYLQVEVAAKVKSTKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAV 290
            R    N  + G ++ +   A  K   N + A K ++F+ S E Q +     + YPV + 
Sbjct: 250 VRVIFPNAGDRGTHVNISGMALTKYAPNRDNALKLMEFLASREAQEIYAKQVFEYPVLSG 309

Query: 291 ELP----KGF 296
             P    KGF
Sbjct: 310 AEPSDVVKGF 319