Pairwise Alignments

Query, 530 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Vibrio cholerae E7946 ATCC 55056

Subject, 577 a.a., 2-aminoethylphosphonate ABC transporter permease protein from Variovorax sp. SCN45

 Score = 77.4 bits (189), Expect = 1e-18
 Identities = 105/492 (21%), Positives = 203/492 (41%), Gaps = 49/492 (9%)

Query: 51  SFYQAFWSTV--------LSVGLAIPVAHALSQRRFP-GRDLLLKLFAMT-LVLPVLVAI 100
           S  +A W+++        +SV  A   A+AL++ R P     + +L A+  L+ P L++ 
Sbjct: 77  SLLRAAWNSIWVSAAVVMISVPTAFVFAYALTRSRMPMPLKAVFRLIALIPLLAPSLLSA 136

Query: 101 FGLIAIYGNSGFLAKTLHSVGFPLPFSIYGLNGILLAHVLFNLPYASRLLLQSLEAIPSE 160
              +  +GN G L   L  V      SIYG  GI++A V    P+A  +L+ +L      
Sbjct: 137 ISFVQWFGNQGALKFLLGGV------SIYGAPGIIMAEVYNTFPHALMILVTALSLADGR 190

Query: 161 QHKLCAHLGMSRWQKFKWVEWPRLRQQLPHVAGLVFMLCFTSFATVMALGGGPKATTIEL 220
            ++    L    +++F  +  P  +  L   A +VF    + F     +GG     +++ 
Sbjct: 191 LYEAATALRTRPFRQFMTITLPSCKYGLISAATVVFTYVVSDFGAPKVIGGNFNVLSVD- 249

Query: 221 AIYQAIKFDFDLQIGALLAIWQMLLCTLLTFTLQRFSHSRPMNSAASKVTERWVRDS-WR 279
            +++ +    +  IGA++ +  +L+ ++++F +      +      +++T R V  S  R
Sbjct: 250 -VFKQVVGQHNFSIGAVVGM-LLLVPSIISFVIDYVVRRK----LKAQLTARSVPYSPKR 303

Query: 280 AKVWD---ASWIVAACVLVLPPLVMVVLAGLNS-----------KLGKVLTSGDFWSAVS 325
            K+ D     +    C L+L  + M +   L S               VL   D   A +
Sbjct: 304 RKLADPLLMLFCTVVCGLLLATIGMAIYTSLISLWPYDLSLTLKHYHFVLVESDMADAYT 363

Query: 326 HSLQVA---SLASSLALASGIAMLLTSRALRLKAAHRRANGVEWIATLILVTPGLVVSTG 382
           +SL VA   ++A SL +  G  ++  +R L L        G+  +A L +  PGLV+  G
Sbjct: 364 NSLIVAIATAVAGSLIVFVGAYLIEKTRNLGL-----MRKGMHLMAVLSMAVPGLVLGLG 418

Query: 383 LFLLLRNITDVFRLAYWIVVAVNALMALPYVVK---TLSQPMWHLAQQYELLCASLGMSG 439
             +   +  +     Y  +  +   M + Y      T    +  +  ++E + ASL +  
Sbjct: 419 YVMFFNHPANPLNFLYQTMAILIISMVVHYYTSSHLTAVTALKQIDNEFEAVSASLKVPF 478

Query: 440 WRRFRLVEWRALRKPLSHAFAIGFLLSMGDLSAIALFGSQDFRTLPLYLYQLLGSYQMDT 499
           ++ F  V        +       F++SM  LS      + +     + +  L  +  +  
Sbjct: 479 FKTFLRVTVPVCLPAILDIGRYFFVVSMASLSCAIFLYTPETILASVAIMHLDDAGDIGP 538

Query: 500 AAVVALAMLIMS 511
           AA +A  +++ S
Sbjct: 539 AAALASLIVVTS 550



 Score = 34.3 bits (77), Expect = 1e-05
 Identities = 57/290 (19%), Positives = 113/290 (38%), Gaps = 36/290 (12%)

Query: 259 SRPMNSAAS---KVTERWVRDSWRAKVWDASWIVAACVLVLPPLVMVVLAGLNSKLGKVL 315
           +RP+ + A+   +   RW RD   A+      +V   V ++ PL+ ++   +  + G+ +
Sbjct: 5   ARPLPARAAFNARPVMRWSRDETIARAILLVVMVMLFVFLIAPLLTILAHAVQDREGRFV 64

Query: 316 TSGDF-------------WSAVSHSLQVASLASSLALASGIAMLLTSRALRLKAAHRRAN 362
               F             W+++  S  V  ++   A     A+  +   + LKA  R   
Sbjct: 65  GLTHFITYFQTPSLLRAAWNSIWVSAAVVMISVPTAFVFAYALTRSRMPMPLKAVFRLIA 124

Query: 363 GVEWIATLILVTPGLVV---STGLFLLLRNITDVFRLAYWIVVAV-----NALMALPYVV 414
            +  +A  +L     V    + G    L     ++     I+  V     +ALM L   +
Sbjct: 125 LIPLLAPSLLSAISFVQWFGNQGALKFLLGGVSIYGAPGIIMAEVYNTFPHALMILVTAL 184

Query: 415 KTLSQPMWHLAQQYELLCASLGMSGWRRFRLVEWRALRKPLSHAFAIGFLLSMGDLSAIA 474
                 ++  A        +L    +R+F  +   + +  L  A  + F   + D  A  
Sbjct: 185 SLADGRLYEAA-------TALRTRPFRQFMTITLPSCKYGLISAATVVFTYVVSDFGAPK 237

Query: 475 LFGSQDFRTLPLYLY-QLLGSYQMDTAAVVALAMLIMSVGWF---YVIER 520
           + G  +F  L + ++ Q++G +     AVV + +L+ S+  F   YV+ R
Sbjct: 238 VIGG-NFNVLSVDVFKQVVGQHNFSIGAVVGMLLLVPSIISFVIDYVVRR 286