Pairwise Alignments

Query, 530 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Vibrio cholerae E7946 ATCC 55056

Subject, 571 a.a., 2-aminoethylphosphonate ABC transporter permease protein from Variovorax sp. SCN45

 Score =  100 bits (248), Expect = 2e-25
 Identities = 115/476 (24%), Positives = 208/476 (43%), Gaps = 36/476 (7%)

Query: 58  STVLSVGLAIPVAHALSQRRFPGRDLLLKLFAMTLVLPVLVAIFGLIAIYGNSGFLAKTL 117
           S V+   +A   A+ L+    P + +L  +  + L+ P L+    L+ ++GN G     +
Sbjct: 91  SAVICTAIAYVYAYGLTLSCMPAKGVLRAVALVPLLAPSLLPAISLVYLFGNQGLFKGLM 150

Query: 118 HSVGFPLPFSIYGLNGILLAHVLFNLPYASRLLLQSLEAIPSEQHKLCAHLGMSRWQKFK 177
             V      SIYG  GI+L  V + LP+A  +L  ++       ++    LG SRW+ F+
Sbjct: 151 GDV------SIYGPLGIVLGSVFWTLPHALLILTTAMATSDGRLYEAAQTLGASRWRIFR 204

Query: 178 WVEWPRLRQQLPHVAGLVFMLCFTSFATVMALGGGPKATTIELAIYQAIKFDFDLQIGAL 237
            V  P  R  L   A +VF+L  T F     +GG  +   +   IY+ +    + Q+GA+
Sbjct: 205 TVTLPSSRYGLIVAAMVVFVLVITDFGVPKVVGG--QTGVLATDIYKQVVGQQNFQMGAV 262

Query: 238 LAIWQMLLCTLLTFTLQRFSHSRPMNSAASKVT---ERWVRDSWRAKVWDASWIVAACVL 294
           + +  +L+  +L+F ++R   S+   + +++ T      V+   RA +   + + A  +L
Sbjct: 263 VGL-VLLIPAVLSFLVERRVRSKQAAALSARATPYQPEPVKSRDRALLVFCA-LTAGAIL 320

Query: 295 VLPPLVMVVLAGLNS----KLGKVLTSGDF-------WSAVSHSLQVASLASSLALASGI 343
           V+  + M V A L S     L     + DF       W +  +SL++A  A+     +G 
Sbjct: 321 VM--IGMAVFASLASYWPYNLAPSFKNYDFSNMDGGGWGSYFNSLRLAVCAA----VAGA 374

Query: 344 AMLLTSRALRLKAAH--RRANGVEWIATLILVTPGLVVSTGLFLLLRNITDVFRLAYW-I 400
            +   S  L  K  H       +  +A L L  PGLV+  G      + ++  R  Y  +
Sbjct: 375 FLTFVSAYLVEKPRHFGLLRELLNLLANLPLAVPGLVLGVGYIFFFISPSNPLRAIYGSM 434

Query: 401 VVAVNALMALPYVVKTLSQ--PMWHLAQQYELLCASLGMSGWRRFRLVEWRALRKPLSHA 458
            + V   +A  + V  L+    +  L ++YEL+  S+G+  WR    V        + + 
Sbjct: 435 TILVVCTVAHFFSVAHLTSLTALRQLDREYELVSESMGVPFWRTLWRVHLPVALPTVLNV 494

Query: 459 FAIGFLLSMGDLSAIALFGSQDFRTLPLYLYQLLGSYQMDTAAVVA-LAMLIMSVG 513
               F+ +M  +SA+    S       + +  +  +  +  AA +A L ML  ++G
Sbjct: 495 GGYFFVNAMTTVSAVVFLYSPQTSLAAVAVLNMDDAGDVAPAAAMASLIMLTAAIG 550