Pairwise Alignments

Query, 530 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Vibrio cholerae E7946 ATCC 55056

Subject, 574 a.a., putative 2-aminoethylphosphonate ABC transporter permease subunit from Pseudomonas sp. SVBP6

 Score = 95.9 bits (237), Expect = 4e-24
 Identities = 114/471 (24%), Positives = 195/471 (41%), Gaps = 42/471 (8%)

Query: 63  VGLAIPVAHALSQRRFPGRDLLLKLFAMTLVLPVLVAIFGLIAIYGNSGFLAKTLHSVGF 122
           V LA   A+AL +   P + L   +  + L+ P ++    L+ ++GN G L   L     
Sbjct: 96  VPLAYLFAYALQRTLIPAKGLWRGISLLPLLAPSMLPAIALVYLFGNQGLLRGLLSD--- 152

Query: 123 PLPFSIYGLNGILLAHVLFNLPYASRLLLQSLEAIPSEQHKLCAHLGMSRWQKFKWVEWP 182
               +IYG  GI+L   ++  P+A  +LL +L    +      + +G   W+ F  + WP
Sbjct: 153 ----NIYGFWGIVLGEAIYTFPHALMILLSALSLADARLFDAASSMGAGPWRAFHSITWP 208

Query: 183 RLRQQLPHVAGLVFMLCFTSFATVMALGGGPKATTIELAIYQAIKFDFDLQIGALLAIWQ 242
             RQ +     LVF L  T F   + +GG  +   +E   Y+A+        GAL+ +  
Sbjct: 209 ATRQAVFAAFCLVFTLTITDFGVPVVVGGDYQVLALE--AYKAVVGQQQFGRGALIGM-V 265

Query: 243 MLLCTLLTFTLQRFSHSRPMNSAASKVTERWVRDSWRAKVWDASWIVAACVLVLPPLVMV 302
           +L+  LL+F +  +   R  +S + +      + S R    DA ++ A  +L+   L++V
Sbjct: 266 LLVPALLSFAVDAWLRRRQGDSMSGRAQVFQPQPSRRR---DACFL-AVVILICAVLLLV 321

Query: 303 VLAGLNSKLGKVL---------------TSGDFWSAVSHSLQVASLASSLALASGIAMLL 347
           V   + S L K                 T+G  W A  +SL +A L ++L    G A++ 
Sbjct: 322 VGMAVYSSLVKFWPYNLSLSLKHYQFDETAGGGWLAYRNSLTMA-LGTALI---GSAVIF 377

Query: 348 TSRALRLKAAHRRANGVEWIATLI----LVTPGLVVSTG---LFLLLRNITDVFRLAYWI 400
           T   L  K   +R  G+  +  L+    +  PGLV+  G    F L  N   VF  +  +
Sbjct: 378 TGAYLMEKTKGQR--GLNLLLRLLSFVPMAVPGLVLGLGYVFFFNLASNPLHVFYGSMAL 435

Query: 401 VVAVNALMALPYVVKTLSQPMWHLAQQYELLCASLGMSGWRRFRLVEWRALRKPLSHAFA 460
           +V       L     T +  +  L  ++E    SL    +R F  V        L     
Sbjct: 436 LVVCTIAHYLTTAQMTATTALRQLDGEFEAAALSLKAPLYRHFLRVTVPICLPALLDIIR 495

Query: 461 IGFLLSMGDLSAIALFGSQDFRTLPLYLYQLLGSYQMDTAAVVALAMLIMS 511
             F+ +M  +SA     S D     + +  +  +  +  AA ++  +L+ S
Sbjct: 496 YLFVSAMTTVSAAIFLYSPDTILAAVAVLNMDDAGNVGGAAAMSTLILLTS 546