Pairwise Alignments

Query, 530 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., Thiamin ABC transporter, transmembrane component from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  457 bits (1177), Expect = e-133
 Identities = 252/516 (48%), Positives = 336/516 (65%), Gaps = 5/516 (0%)

Query: 8   GFWVAAGVATFVLAALAALLWQSPPFNLNLIWQDAYYRHVTQFSFYQAFWSTVLSVGLAI 67
           G   AA + T  LAA  AL   +P    + IW+D+Y  HV +FSF+QAF S VLSV  A+
Sbjct: 16  GLCAAALMITVSLAAFLALWLNAPSGAWSTIWRDSYLWHVVRFSFWQAFLSAVLSVVPAV 75

Query: 68  PVAHALSQRRFPGRDLLLKLFAMTLVLPVLVAIFGLIAIYGNSGFLAKTLHSVGFPLPFS 127
            +A AL +RRFPGR  LL+L AMTL+LPVLVA+FG++++YG  G+LA     +G    FS
Sbjct: 76  FLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGWLASLWQMLGLQWTFS 135

Query: 128 IYGLNGILLAHVLFNLPYASRLLLQSLEAIPSEQHKLCAHLGMSRWQKFKWVEWPRLRQQ 187
            YGL GILLAHV FNLP ASRLLLQSLE+IP EQ +L A LGM  W  F++VEWP LR+Q
Sbjct: 136 PYGLQGILLAHVFFNLPMASRLLLQSLESIPGEQRQLAAQLGMRGWHFFRFVEWPWLRRQ 195

Query: 188 LPHVAGLVFMLCFTSFATVMALGGGPKATTIELAIYQAIKFDFDLQIGALLAIWQMLLCT 247
           +P VA L+FMLCF SFATV++LGGGP+ATTIELAI+QA+ +D+D    A+LA+ QM+ C 
Sbjct: 196 IPPVAALIFMLCFASFATVLSLGGGPQATTIELAIFQALSYDYDPARAAMLALIQMVCCL 255

Query: 248 LLTFTLQRFSHSRPMNSAASKVTERW--VRDSWRAKVWDASWIVAACVLVLPPLVMVVLA 305
            L    QR S +    +    +T+ W    D   +++ DA  IV A +L+LPPLV VV+ 
Sbjct: 256 ALVLLSQRLSKA---IAPGMTLTQGWRDPDDRLHSRLTDALLIVLALLLLLPPLVAVVVD 312

Query: 306 GLNSKLGKVLTSGDFWSAVSHSLQVASLASSLALASGIAMLLTSRALRLKAAHRRANGVE 365
           G+N  L +VL     W AV  SL++A  A  L +   + +L +SR LR +        +E
Sbjct: 313 GVNRSLPEVLAQPILWQAVWTSLRIALAAGVLCVVLTMMLLWSSRELRQRQQLFAGQTLE 372

Query: 366 WIATLILVTPGLVVSTGLFLLLRNITDVFRLAYWIVVAVNALMALPYVVKTLSQPMWHLA 425
               LIL  PG+V++TG FLLL N   +   A  IV+  NALMA+PY +K L  PM  + 
Sbjct: 373 LSGMLILAMPGIVLATGFFLLLNNSVGLPESADGIVIFTNALMAIPYALKVLENPMRDIT 432

Query: 426 QQYELLCASLGMSGWRRFRLVEWRALRKPLSHAFAIGFLLSMGDLSAIALFGSQDFRTLP 485
            +Y +LC SLG+ GW R ++VE RAL++PL+ A A   +LS+GD   +ALFG+ +FRTLP
Sbjct: 433 ARYGMLCQSLGIEGWSRLKIVELRALKRPLAQALAFACVLSIGDFGVVALFGNDNFRTLP 492

Query: 486 LYLYQLLGSYQMDTAAVVALAMLIMSVGWFYVIERL 521
            YLYQ +GSY+    AV AL +L++    F +IE+L
Sbjct: 493 FYLYQQIGSYRSQDGAVTALILLLLCFTLFTLIEKL 528