Pairwise Alignments

Query, 530 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Dickeya dianthicola ME23

 Score =  430 bits (1106), Expect = e-125
 Identities = 241/525 (45%), Positives = 326/525 (62%), Gaps = 11/525 (2%)

Query: 5   PQLGFWVAAGVATFVLA------ALAALLWQSPPFNLNLIWQDAYYRHVTQFSFYQAFWS 58
           P +  W+  G+   VL       A  AL   +P      +W D+Y  HV +FSF+QA  S
Sbjct: 7   PLIPGWLWPGLLAAVLLISTAVLAFGALWLDAPGAPWLSLWDDSYLWHVIRFSFWQALLS 66

Query: 59  TVLSVGLAIPVAHALSQRRFPGRDLLLKLFAMTLVLPVLVAIFGLIAIYGNSGFLAKTLH 118
            +LS   A+ +A AL +RRFPG  LLL+L AMTLVLPVLVA+FG++++YG  G+LA+ L 
Sbjct: 67  ALLSTLPALFLARALYRRRFPGHRLLLRLCAMTLVLPVLVAVFGILSVYGREGWLARLLM 126

Query: 119 SVGFPLPFSIYGLNGILLAHVLFNLPYASRLLLQSLEAIPSEQHKLCAHLGMSRWQKFKW 178
             G    FS YGL GILLAHV FNLP A+RL LQ+LE I +EQ +L A LG+  W  F+ 
Sbjct: 127 QFGIEYRFSPYGLQGILLAHVFFNLPLATRLFLQALEGIATEQRQLAAQLGLRGWHFFRL 186

Query: 179 VEWPRLRQQLPHVAGLVFMLCFTSFATVMALGGGPKATTIELAIYQAIKFDFDLQIGALL 238
           VEWP LR+QL     L+FMLCF SFATV+ALGGGP+ATTIELAIYQA+ FD+D    ALL
Sbjct: 187 VEWPWLRRQLLPAGALIFMLCFASFATVLALGGGPQATTIELAIYQALSFDYDPARAALL 246

Query: 239 AIWQMLLCTLLTFTLQRFSHSRPMNSAASKVTERW--VRDSWRAKVWDASWIVAACVLVL 296
           A+ QM+ C  L    QR      + +      +RW   +DSW ++V D   I AA +L+L
Sbjct: 247 ALLQMVCCLGLVLLSQRLGR---LLAVGVGNRQRWRDPQDSWFSRVTDMLLIAAALLLLL 303

Query: 297 PPLVMVVLAGLNSKLGKVLTSGDFWSAVSHSLQVASLASSLALASGIAMLLTSRALRLKA 356
           PPL+ V   GLN  L +VL     W A+  SL++A  A +L++   + +L +SR L+L+ 
Sbjct: 304 PPLLAVAADGLNRSLPEVLRQPALWQALWMSLRIALAAGALSVVLTLMLLWSSRELKLRR 363

Query: 357 AHRRANGVEWIATLILVTPGLVVSTGLFLLLRNITDVFRLAYWIVVAVNALMALPYVVKT 416
               A  ++    LIL  PG+V+++G FLL      +    Y +VV  NAL+A+PY +K 
Sbjct: 364 RQLPAQLLDMSGMLILAMPGIVLASGFFLLFNRTIGLPASPYGLVVLTNALLAIPYAMKV 423

Query: 417 LSQPMWHLAQQYELLCASLGMSGWRRFRLVEWRALRKPLSHAFAIGFLLSMGDLSAIALF 476
           L  PM+  A +Y LLC SL +  W R R+VE +ALR P++ A A   +LS+GD   IALF
Sbjct: 424 LENPMYDTAARYSLLCQSLDIRCWHRLRVVELKALRAPIAQALAFACVLSVGDFGIIALF 483

Query: 477 GSQDFRTLPLYLYQLLGSYQMDTAAVVALAMLIMSVGWFYVIERL 521
           G++ FRTLP YLYQ +G+Y+    AV AL +L++    F +IE+L
Sbjct: 484 GNEQFRTLPFYLYQQIGAYRSADGAVTALLLLVLCFTLFTLIEKL 528