Pairwise Alignments

Query, 530 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 16/231 (6%)

Query: 38  IWQDAYYRHVTQFSFYQAFWSTVLSVGLAIPVAHALSQRRFPGRDLLLKLFAMTLVLPVL 97
           +W +         S+  A   T+  + LA+P A+A  +  FPG+ L   L  + +VLP  
Sbjct: 62  LWNNTSLPDALLHSYLLAPMVTLTCLLLAMPTAYAFGRLSFPGKGLAQTLTLLPIVLPGF 121

Query: 98  VAIFGLIAIYGNSGFLAKTLHSVGFPLPFSIYGLNGILLAHVLFNLPYASRLLLQSLEAI 157
           V     +A+     F +  L  +GF   F      GI L H +  LPYA R+L  S   +
Sbjct: 122 V-----VAV-----FFSSLLTRLGFYSRFM-----GIFLGHTVLFLPYAIRILSVSFSQV 166

Query: 158 PSEQHKLCAHLGMSRWQKFKWVEWPRLRQQLPHVAGLVFMLCFTSFATVMALGGGPKATT 217
             +      +LG SR + F+   WP L+  +     +VF+L    F +V  + G P   T
Sbjct: 167 RQDLVDAARNLGASRREVFRVAYWPALQSGVMAAMIMVFILSIEEF-SVSYIVGAPDFIT 225

Query: 218 IELAIYQAIKFDFDLQIGALLAIWQMLLCTLLTFTLQRFSHSRPMNSAASK 268
           +   +Y  + ++F     A++++  ++   LL   ++R     P ++  +K
Sbjct: 226 VPTILYSYLGYNFIRPNAAVVSLILVVPNVLLMLLMERCLKHVPASAFVNK 276



 Score = 63.5 bits (153), Expect = 9e-15
 Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 3/161 (1%)

Query: 367 IATLILVTPGLVVSTGLFLLLRNITDVFRLAYWIVVAVNALMALPYVVKTLSQPMWHLAQ 426
           +  L +V PG VV+     LL  +   F   +  +   + ++ LPY ++ LS     + Q
Sbjct: 111 LTLLPIVLPGFVVAVFFSSLLTRLG--FYSRFMGIFLGHTVLFLPYAIRILSVSFSQVRQ 168

Query: 427 QYELLCASLGMSGWRRFRLVEWRALRKPLSHAFAIGFLLSMGDLSAIALFGSQDFRTLPL 486
                  +LG S    FR+  W AL+  +  A  + F+LS+ + S   + G+ DF T+P 
Sbjct: 169 DLVDAARNLGASRREVFRVAYWPALQSGVMAAMIMVFILSIEEFSVSYIVGAPDFITVPT 228

Query: 487 YLYQLLG-SYQMDTAAVVALAMLIMSVGWFYVIERLFAQRP 526
            LY  LG ++    AAVV+L +++ +V    ++ER     P
Sbjct: 229 ILYSYLGYNFIRPNAAVVSLILVVPNVLLMLLMERCLKHVP 269