Pairwise Alignments

Query, 530 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., ABC transporter permease from Dickeya dadantii 3937

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 56/231 (24%), Positives = 102/231 (44%), Gaps = 16/231 (6%)

Query: 38  IWQDAYYRHVTQFSFYQAFWSTVLSVGLAIPVAHALSQRRFPGRDLLLKLFAMTLVLPVL 97
           +W +         S+  A   T+  + LA+P A+A  +  FPG+ L   L  + +VLP  
Sbjct: 62  LWNNTSLPDALLHSYLLAPMVTLTCLLLAMPTAYAFGRLSFPGKGLAQALTLLPIVLPGF 121

Query: 98  VAIFGLIAIYGNSGFLAKTLHSVGFPLPFSIYGLNGILLAHVLFNLPYASRLLLQSLEAI 157
           V     +A++ +S  +   ++S             GI L H +  LPYA R+L  S   +
Sbjct: 122 V-----VAVFFSSLLMRLGVYS----------RFMGIFLGHTVLFLPYAIRILSVSFSQV 166

Query: 158 PSEQHKLCAHLGMSRWQKFKWVEWPRLRQQLPHVAGLVFMLCFTSFATVMALGGGPKATT 217
             +      +LG SR + F+   WP L+        +VF+L    F +V  + G P   T
Sbjct: 167 RQDLVDAARNLGASRREIFRVAYWPALQSGALAAMIMVFILSIEEF-SVSYIVGAPDFIT 225

Query: 218 IELAIYQAIKFDFDLQIGALLAIWQMLLCTLLTFTLQRFSHSRPMNSAASK 268
           +   +Y  + ++F     A++++  ++   LL   ++R     P ++  +K
Sbjct: 226 VPTILYSYLGYNFIRPNAAVVSLILVVPNVLLMLLMERCLRHVPASAFVNK 276



 Score = 61.6 bits (148), Expect = 3e-14
 Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 3/161 (1%)

Query: 367 IATLILVTPGLVVSTGLFLLLRNITDVFRLAYWIVVAVNALMALPYVVKTLSQPMWHLAQ 426
           +  L +V PG VV+     LL  +    R  +  +   + ++ LPY ++ LS     + Q
Sbjct: 111 LTLLPIVLPGFVVAVFFSSLLMRLGVYSR--FMGIFLGHTVLFLPYAIRILSVSFSQVRQ 168

Query: 427 QYELLCASLGMSGWRRFRLVEWRALRKPLSHAFAIGFLLSMGDLSAIALFGSQDFRTLPL 486
                  +LG S    FR+  W AL+     A  + F+LS+ + S   + G+ DF T+P 
Sbjct: 169 DLVDAARNLGASRREIFRVAYWPALQSGALAAMIMVFILSIEEFSVSYIVGAPDFITVPT 228

Query: 487 YLYQLLG-SYQMDTAAVVALAMLIMSVGWFYVIERLFAQRP 526
            LY  LG ++    AAVV+L +++ +V    ++ER     P
Sbjct: 229 ILYSYLGYNFIRPNAAVVSLILVVPNVLLMLLMERCLRHVP 269