Pairwise Alignments

Query, 530 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score = 66.2 bits (160), Expect = 1e-15
 Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 17/206 (8%)

Query: 19  VLAALAALLWQSPPFNLN---LIWQDAYYRHVTQFSFYQAFWSTVLSVGLAIPVAHALSQ 75
           +L  L  L+W +          I  D+   +  + SF  AF + +++    + VA  L++
Sbjct: 36  ILIPLGGLVWSTAKLGFADFIAIATDSRTLNALRVSFGTAFIAALVNAVFGVIVAWVLTR 95

Query: 76  RRFPGRDLLLKLFAMTLVLPVLVAIFGLIAIYGNSGFLAKTLHSVGFPLPFSIYGLNGIL 135
            RFPGR  +  +  +   LP  VA   L  +Y N G++       G  + F+     GI+
Sbjct: 96  YRFPGRRFVDAIVDLPFALPTAVAGIALTTLYANRGWVGSLFEPFGIKIAFT---PTGIV 152

Query: 136 LAHVLFNLPYASRLLLQSLEAIPSEQHKLCAHLGMSRWQKFKWVEWPRLRQQLPHVAGLV 195
           +A +   LP+  R +   +E I  +  ++ A LG +R+Q    V  P L   +       
Sbjct: 153 IALIFIGLPFVVRTVQPVMEEIDRQVEEVAATLGANRFQTITRVLLPSLTPAI------- 205

Query: 196 FMLCFTSFATVMALGGGPKATTIELA 221
                T FA   A G G   + I +A
Sbjct: 206 ----LTGFALAFARGVGEYGSVIFIA 227



 Score = 41.6 bits (96), Expect = 4e-08
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 4/127 (3%)

Query: 400 IVVAVNALMALPYVVKTLSQPMWHLAQQYELLCASLGMSGWRRFRLVEWRALRKPLSHAF 459
           IV+A+   + LP+VV+T+   M  + +Q E + A+LG + ++    V   +L   +   F
Sbjct: 151 IVIAL-IFIGLPFVVRTVQPVMEEIDRQVEEVAATLGANRFQTITRVLLPSLTPAILTGF 209

Query: 460 AIGFLLSMGDL-SAIALFGSQDF--RTLPLYLYQLLGSYQMDTAAVVALAMLIMSVGWFY 516
           A+ F   +G+  S I + G+  +     PL +   L  +    A  +A  MLI+S    +
Sbjct: 210 ALAFARGVGEYGSVIFIAGNIPYVSEIAPLLIVIRLEEFNYAAATGIATIMLIISFAMLF 269

Query: 517 VIERLFA 523
           +I  + A
Sbjct: 270 LINLIQA 276