Pairwise Alignments

Query, 244 a.a., thiamine ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  152 bits (383), Expect = 1e-41
 Identities = 89/230 (38%), Positives = 131/230 (56%), Gaps = 6/230 (2%)

Query: 4   RKSMLALDKVR-----YEYEHEWFEFDLNVADGDIVALMGPSGAGKSTLLSLVAGFIEPV 58
           RK++  L ++R     ++ +H   +  L +  G+I AL+G SG GKSTLL ++AGF  P 
Sbjct: 13  RKALTPLLEIRNLTKSFDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEPPS 72

Query: 59  SGSIKVNDQSVLGLAPYQRPFSMLFQEHNLFAHLTVRENIGLGLHPGLKLNAEQKQQVVD 118
           SG I ++   +  + PYQRP +M+FQ + LF H+TV +NI  GL       AE   +V +
Sbjct: 73  SGQIMLDGVDLAHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEITSRVNE 132

Query: 119 AAQQVGIADYLDRLPEQLSGGQRQRVALARCFVQPNPIWLLDEPFSALDPLLREEMLALV 178
               V + ++  R P QLSGGQRQRVALAR   +   + LLDEP  ALD  LR+ M   V
Sbjct: 133 MLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEV 192

Query: 179 KQLASERQRTVVMVTHHLSDARAIASQIAFLSQGKVKVVSDCQAVTAQHP 228
             +      T VMVTH   +A  +A +IA +++GK   + + + +  +HP
Sbjct: 193 VDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEI-YEHP 241