Pairwise Alignments

Query, 92 a.a., phosphocarrier protein NPr from Vibrio cholerae E7946 ATCC 55056

Subject, 838 a.a., D-trehalose PTS system, I, HPr, and IIA components (from data) from Pseudomonas simiae WCS417

 Score = 51.2 bits (121), Expect = 2e-11
 Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 5   SQTVLIQNRLGLHARAAVKLVQLAQSFDAVLTVQSQDGREATADSVMGLLMLESAQGQNV 64
           S+ + + N  GLHAR A    Q A+ F+A + +  Q  + A A S++ ++ L++ QG  +
Sbjct: 169 SKPLTLPNANGLHARPAAVFAQAAKGFNASIYLHKQT-QSANAKSLVAIMALQTVQGDTL 227

Query: 65  VISAEGSQAEQALQAVCQLIEQ 86
            +SA G  AE A++A+  L+ +
Sbjct: 228 QVSAAGEDAEAAIKALVALLAE 249