Pairwise Alignments

Query, 286 a.a., RNase adaptor protein RapZ from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., RNase adapter protein RapZ from Variovorax sp. SCN45

 Score =  246 bits (627), Expect = 6e-70
 Identities = 134/276 (48%), Positives = 188/276 (68%), Gaps = 15/276 (5%)

Query: 3   LIVVSGQSGAGKSVALRVLEDLGYYCVDNLPVSLLTAFIQSVQGSQQN--VAVSIDIRNL 60
           L++++G SG+GKSVAL  LED GYYCVDNLP  LLTAFI ++Q  QQ   VA+++D+R+ 
Sbjct: 5   LVLITGMSGSGKSVALHALEDAGYYCVDNLPPELLTAFI-ALQHEQQTPRVAIAMDVRSG 63

Query: 61  PKEPSLVQDVLDQLKQNNDVSM--LFLDASKETLLKRYSETRRIHPLSLSQSKPS----- 113
              P +V   L+ L+++ ++S+  LFLDA+ + LL+RYSETRR HPLS  + +       
Sbjct: 64  VSLP-IVPQQLEALRRDGEISLRSLFLDATTDALLRRYSETRRRHPLSRQEGRTDVPEQH 122

Query: 114 --LAQAIELEKQLLGPLKEQADLLLDSSNQSLHELSETVRMRIEGRERKDLVMVFQSFGF 171
             L QAIELE++LL  L++ AD++ D+S     +L   ++  I   +   L +VF+SF F
Sbjct: 123 RVLVQAIELERELLADLRDGADVI-DTSLIRPAQLQSYIKSLISAPQSV-LTLVFESFAF 180

Query: 172 KYGLPTDADYVFDVRFLPNPHWEPDLRPLTGLDAPIKSFLEGHSEVMELKQQIQKFFEYW 231
           K G+P DADYVFDVR LPNPH+ P LRPLTG D P+  +L  H EV  +   I++F  +W
Sbjct: 181 KRGVPLDADYVFDVRMLPNPHYVPALRPLTGRDEPVIEWLREHDEVARMYDDIEQFLSHW 240

Query: 232 LPMLEKNNRSYLTIAIGCTGGKHRSVYLTQQLGEYF 267
           L  L +++RSY+T+AIGCTGG+HRSV+L +QL   F
Sbjct: 241 LDALARDHRSYVTVAIGCTGGQHRSVFLVEQLARLF 276