Pairwise Alignments

Query, 286 a.a., RNase adaptor protein RapZ from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., putative ATP-binding protein UPF0042 from Pseudomonas putida KT2440

 Score =  262 bits (669), Expect = 7e-75
 Identities = 133/286 (46%), Positives = 190/286 (66%), Gaps = 7/286 (2%)

Query: 1   MRLIVVSGQSGAGKSVALRVLEDLGYYCVDNLPVSLLTAFIQSV----QGSQQNVAVSID 56
           MRLI+VSG+SG+GKS AL VLED G+YC+DNLP  LL    ++     +  Q  VAVSID
Sbjct: 1   MRLIIVSGRSGSGKSTALDVLEDSGFYCIDNLPAGLLPQLAENALINTELLQPKVAVSID 60

Query: 57  IRNLPKEPSLVQDVLDQLKQNN-DVSMLFLDASKETLLKRYSETRRIHPLSLSQSKPSLA 115
            RNLP       ++L++ +  +    +L+LDA +E LLKR+SETRR HPL+   +  SLA
Sbjct: 61  ARNLPSHLMRFPELLEEARARHIQCDVLYLDADEEVLLKRFSETRRRHPLT--NANRSLA 118

Query: 116 QAIELEKQLLGPLKEQADLLLDSSNQSLHELSETVRMRIEGRERKDLVMVFQSFGFKYGL 175
           +AI +E  LLGP+ + ADL +D++N +L++L +++++R+  +       + +SFGFK G+
Sbjct: 119 EAIRVESDLLGPIADLADLKIDTTNLNLYQLRDSIKLRLLNQPEPGTAFLVESFGFKRGM 178

Query: 176 PTDADYVFDVRFLPNPHWEPDLRPLTGLDAPIKSFLEGHSEVMELKQQIQKFFEYWLPML 235
           P DAD VFDVR LPNP+W+P+LR  +GLD P+  +L    +V ++   I  +   WLP  
Sbjct: 179 PVDADLVFDVRCLPNPYWKPELREHSGLDQPVIDYLAAQPDVEDMYNDISSYLLKWLPRF 238

Query: 236 EKNNRSYLTIAIGCTGGKHRSVYLTQQLGEYFAQLGHQVQLRHTSL 281
             +NR+Y+TIAIGCTGG HRSVY+T++LG    Q    VQ+RH  L
Sbjct: 239 AASNRAYVTIAIGCTGGHHRSVYITERLGRQLQQTLKNVQVRHRDL 284