Pairwise Alignments

Query, 286 a.a., RNase adaptor protein RapZ from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

 Score =  336 bits (861), Expect = 4e-97
 Identities = 158/285 (55%), Positives = 212/285 (74%), Gaps = 2/285 (0%)

Query: 1   MRLIVVSGQSGAGKSVALRVLEDLGYYCVDNLPVSLLTAFIQSVQGSQQNVAVSIDIRNL 60
           M L++VSG+SG+GKSVALR LED+G+YCVDNLPV LL    +++   + + AVSID+RN+
Sbjct: 1   MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTLADREISAAVSIDVRNM 60

Query: 61  PKEPSLVQDVLDQLKQNNDVSMLFLDASKETLLKRYSETRRIHPLSLSQSKPSLAQAIEL 120
           P+ P + +  +  L       +LFLDA + TL++RYS+TRR+HPLS      SL  AI+ 
Sbjct: 61  PESPEIFEQAMSNLPDAFSPQLLFLDADRNTLIRRYSDTRRLHPLS--SKNLSLESAIDK 118

Query: 121 EKQLLGPLKEQADLLLDSSNQSLHELSETVRMRIEGRERKDLVMVFQSFGFKYGLPTDAD 180
           E  LL PL+ +ADL++D+S  S+HEL+E +R R+ G+  ++L MVF+SFGFK+G+P DAD
Sbjct: 119 ESDLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDAD 178

Query: 181 YVFDVRFLPNPHWEPDLRPLTGLDAPIKSFLEGHSEVMELKQQIQKFFEYWLPMLEKNNR 240
           YVFDVRFLPNPHW+P LRP+TGLD P+ +FL+ H+EV     Q + + E WLPMLE NNR
Sbjct: 179 YVFDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNR 238

Query: 241 SYLTIAIGCTGGKHRSVYLTQQLGEYFAQLGHQVQLRHTSLEKQQ 285
           SYLT+AIGCTGGKHRSVY+ +QL +YF   G  VQ RH +LEK++
Sbjct: 239 SYLTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRHRTLEKRK 283