Pairwise Alignments

Query, 286 a.a., RNase adaptor protein RapZ from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., glmZ(sRNA)-inactivating NTPase from Alteromonas macleodii MIT1002

 Score =  322 bits (826), Expect = 5e-93
 Identities = 154/283 (54%), Positives = 211/283 (74%), Gaps = 2/283 (0%)

Query: 1   MRLIVVSGQSGAGKSVALRVLEDLGYYCVDNLPVSLLTAFIQSVQGSQQNVAVSIDIRNL 60
           M+LI++SG+SG+GKSVALR LEDLGYYCVDN+PV+LL     +V      VAVSID+RNL
Sbjct: 1   MKLIIISGRSGSGKSVALRALEDLGYYCVDNIPVNLLPTLTHTVVDEYDQVAVSIDVRNL 60

Query: 61  PKEPSLVQDVLDQLKQNNDVSMLFLDASKETLLKRYSETRRIHPLSLSQSKPSLAQAIEL 120
           PK P  + ++LD L  +  ++++++DAS + L+KR+SETRR+HPL+  +   SL++AI+ 
Sbjct: 61  PKNPDDLVEILDYLPSSWSMTIVYIDASDDVLVKRFSETRRLHPLA--KLNKSLSEAIKA 118

Query: 121 EKQLLGPLKEQADLLLDSSNQSLHELSETVRMRIEGRERKDLVMVFQSFGFKYGLPTDAD 180
           E  LL P+ E+ADL LD+   ++H+L+E +R RI G++   LV+VF+SFGFK+G+P DAD
Sbjct: 119 ESALLAPIAERADLYLDTDKLTIHQLAELIRERILGKKSSRLVLVFESFGFKHGIPKDAD 178

Query: 181 YVFDVRFLPNPHWEPDLRPLTGLDAPIKSFLEGHSEVMELKQQIQKFFEYWLPMLEKNNR 240
           YVFD RFLPNPHWEPDL+ LTGLDAP++ FL     V +   QIQ     WLP LE+NNR
Sbjct: 179 YVFDARFLPNPHWEPDLKHLTGLDAPVEVFLGSQPVVTKFIWQIQNLITTWLPHLERNNR 238

Query: 241 SYLTIAIGCTGGKHRSVYLTQQLGEYFAQLGHQVQLRHTSLEK 283
           SY+T+AIGCTGG+HRSVY+ Q L + F+++   VQ+RH  L +
Sbjct: 239 SYVTVAIGCTGGQHRSVYIAQTLSKTFSEIHPDVQIRHRELNQ 281