Pairwise Alignments

Query, 148 a.a., PTS IIA-like nitrogen-regulatory protein PtsN from Vibrio cholerae E7946 ATCC 55056

Subject, 154 a.a., PTS fructose transporter subunit IIA from Pseudomonas simiae WCS417

 Score =  113 bits (282), Expect = 1e-30
 Identities = 56/130 (43%), Positives = 87/130 (66%), Gaps = 1/130 (0%)

Query: 20  SKKRALEIISEIAALHTGQ-NATELFECMLSREKMGSTGIGNGIAIPHARMSDSENAVAV 78
           SKK+ALE I+ + +    +    +++E +++REK+GSTG GNGIAIPH R+   E  V+ 
Sbjct: 21  SKKKALEQIANLISREVPELEMQDVYEALIAREKLGSTGFGNGIAIPHCRLKGCETPVSA 80

Query: 79  LLQCEEPIEFDSIDNRPVDLLFALLVPEDQCKEHLKTLACMAERLNDKQILKQLRNAASD 138
           LL  + PI+FD+ID  PVDLLF LLVP+     HL+ L  +A  L+ K +  +LR+A S+
Sbjct: 81  LLHLDAPIDFDAIDGAPVDLLFVLLVPQAATDAHLELLRQIASMLDRKDVRDKLRSAKSN 140

Query: 139 QELYNIMVNQ 148
           + LY +++++
Sbjct: 141 EALYQVVLDE 150