Pairwise Alignments

Query, 241 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 602 a.a., Vitamin B12 import ATP-binding protein BtuD from Xanthobacter sp. DMC5

 Score =  147 bits (370), Expect = 6e-40
 Identities = 88/235 (37%), Positives = 131/235 (55%), Gaps = 4/235 (1%)

Query: 3   ILKAQHLAKSYKKRKVVSDVSLQVESGQIVGLLGPNGAGKTTSFYMIVGLVARDEGTITI 62
           ILKA  ++K++     V DVS+ V SG+I+G++GPNGAGKTT F ++ G +    G+IT 
Sbjct: 354 ILKASGVSKNFGGVFAVRDVSIDVRSGEILGIIGPNGAGKTTLFSLLAGSLKPSSGSITF 413

Query: 63  DDNDISILPMHSRSRMGIGYLPQEASIFRKLSVEDNIMAV-LQTREELTHEERQDKLEDL 121
           D   I+ LP H   R GIG   Q    F  L+V + + A  L  R E    E       +
Sbjct: 414 DGRQIAGLPSHEICRAGIGRTFQITRAFPTLTVAETVYAAALVGRPE---GEAAAIAGSV 470

Query: 122 LEEFHIQHIRKSAGMALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVIDIKKIIE 181
           L    +   R  A   ++   +RR+EIARALA  P+ ILLDE  AG+ P  + D  ++I 
Sbjct: 471 LSLTRLDPYRDVASADVTLAVQRRLEIARALATRPRLILLDEIMAGLTPREINDAIELIR 530

Query: 182 HLRDRGLGVLITDHNVRETLDVCEKAYIVSQGRLIAEGTPQDVLNNEQVKQVYLG 236
            +RD G+ V+  +H++R  + + ++  ++  G LIAEG P DV  + +V + YLG
Sbjct: 531 SIRDSGVTVIFIEHHIRAVMALSDRIVVLDAGELIAEGVPSDVARDPRVVEAYLG 585