Pairwise Alignments

Query, 241 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., Vitamin B12 import ATP-binding protein BtuD from Xanthobacter sp. DMC5

 Score =  291 bits (744), Expect = 2e-83
 Identities = 146/238 (61%), Positives = 184/238 (77%), Gaps = 1/238 (0%)

Query: 4   LKAQHLAKSYKKRKVVSDVSLQVESGQIVGLLGPNGAGKTTSFYMIVGLVARDEGTITID 63
           L A  LAKSY  RKVV DVS+ V  G+ VGLLGPNGAGKTT FYM+ GLV  D G I +D
Sbjct: 127 LAAFGLAKSYGGRKVVKDVSMNVRRGEAVGLLGPNGAGKTTCFYMVTGLVKADAGRIELD 186

Query: 64  DNDISILPMHSRSRMGIGYLPQEASIFRKLSVEDNIMAVLQTREELTHEERQDKLEDLLE 123
            +DI+ LPM+ R+R+G+GYLPQEASIFR LSVEDNIM VLQ  E      R+++ E LLE
Sbjct: 187 GHDITPLPMYRRARLGVGYLPQEASIFRGLSVEDNIMGVLQVSEP-NRARRREETEALLE 245

Query: 124 EFHIQHIRKSAGMALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVIDIKKIIEHL 183
           EF I H+RKS  +ALSGGERRR+EIARALA  P F+LLDEPFAG+DPI+V DI+ ++ HL
Sbjct: 246 EFKITHVRKSPSIALSGGERRRLEIARALATKPAFMLLDEPFAGIDPIAVGDIQALVRHL 305

Query: 184 RDRGLGVLITDHNVRETLDVCEKAYIVSQGRLIAEGTPQDVLNNEQVKQVYLGEQFRL 241
             RG+GVLITDHNVRETL + ++AYI+  G ++ EG P+ ++++  V+++YLGE+FRL
Sbjct: 306 TSRGIGVLITDHNVRETLGLIDRAYIIHSGAVLMEGDPEAIVSSPDVRRLYLGEEFRL 363