Pairwise Alignments

Query, 241 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., High-affinity branched-chain amino acid transport ATP-binding protein LivF from Xanthobacter sp. DMC5

 Score =  147 bits (372), Expect = 1e-40
 Identities = 80/238 (33%), Positives = 138/238 (57%), Gaps = 10/238 (4%)

Query: 1   MAILKAQHLAKSYKKRKVVSDVSLQVESGQIVGLLGPNGAGKTTSFYMIVGLVARDEGTI 60
           MA+L+ + L+  Y    VV D++ ++E G+IV L+G NGAGKT++   ++GL+ R EG +
Sbjct: 1   MAMLEVEKLSAWYGPSHVVHDLTFKIEQGEIVALVGRNGAGKTSTLRAVMGLMPRAEGRV 60

Query: 61  TIDDNDISILPMHSRSRMGIGYLPQEASIFRKLSVEDN----IMAVLQTREELTHEERQD 116
           T D  D+  L  H+R R+G+GY+P++  I   L+V +N    ++A  +T E    +E   
Sbjct: 61  TFDGTDLLPLGAHARFRLGLGYVPEDRRIVPGLTVRENLQLGLVAAGRTDERAAIDEIAK 120

Query: 117 KLEDLLEEFHIQHIRKSAGMALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVIDI 176
               L E    Q      G  +SGGE++ + IARA+ + P+ +LLDEP  G+ P+ V ++
Sbjct: 121 SFPRLKERLEQQ------GTTMSGGEQQMLAIARAIISKPKMVLLDEPSEGIMPVLVEEM 174

Query: 177 KKIIEHLRDRGLGVLITDHNVRETLDVCEKAYIVSQGRLIAEGTPQDVLNNEQVKQVY 234
             +   LRD+G  +L+ + NV   L++  +A I+ QG L+ + +   +L ++ ++  Y
Sbjct: 175 GVLFRRLRDQGTTLLLVEQNVEWALNLASRAIIIDQGELVHQSSAAALLADKDIQDRY 232