Pairwise Alignments

Query, 241 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Variovorax sp. SCN45

 Score =  301 bits (771), Expect = 8e-87
 Identities = 146/247 (59%), Positives = 195/247 (78%), Gaps = 9/247 (3%)

Query: 4   LKAQHLAKSYKKRKVVSDVSLQVESGQIVGLLGPNGAGKTTSFYMIVGLVARDEGTITID 63
           L A+ L KSY  R VV DVSL V+ G++VGLLGPNGAGKTTSFYMIVGLV  D G ITID
Sbjct: 18  LVARGLKKSYGSRTVVKDVSLDVQKGEVVGLLGPNGAGKTTSFYMIVGLVRADAGDITID 77

Query: 64  DNDISILPMHSRSRMGIGYLPQEASIFRKLSVEDNIMAVLQTREE---------LTHEER 114
              I+ +P+H R+RMG+ YLPQEASIFRKL+VE+N+ AVL+ ++E         L+ +  
Sbjct: 78  GEPIAHMPIHRRARMGLSYLPQEASIFRKLTVEENVRAVLELQQEPDASGKLMPLSKQHM 137

Query: 115 QDKLEDLLEEFHIQHIRKSAGMALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVI 174
           +++L +LL +  + H+R S  +ALSGGERRRVEIARALA  P+FILLDEPFAG+DPI+VI
Sbjct: 138 EERLSELLADLRVDHLRDSPALALSGGERRRVEIARALATQPRFILLDEPFAGIDPIAVI 197

Query: 175 DIKKIIEHLRDRGLGVLITDHNVRETLDVCEKAYIVSQGRLIAEGTPQDVLNNEQVKQVY 234
           +I++II  L++RG+GVLITDHNVRETL +C+ A+I+S G ++A+GTP ++++N +V++VY
Sbjct: 198 EIQRIISFLKERGIGVLITDHNVRETLGICDHAFIISDGHVLAQGTPSEIVDNAEVRRVY 257

Query: 235 LGEQFRL 241
           LGE FR+
Sbjct: 258 LGEHFRM 264