Pairwise Alignments

Query, 241 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 267 a.a., ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  142 bits (357), Expect = 9e-39
 Identities = 80/250 (32%), Positives = 139/250 (55%), Gaps = 14/250 (5%)

Query: 3   ILKAQHLAKSYKKRKVVSDVSLQVESGQIVGLLGPNGAGKTTSFYMIVGLVARDEGTITI 62
           +L  +++++ +   KV+ DV+L +  G I GL+GPNGAGKTT F +I GL+    GTI  
Sbjct: 6   LLTLKNVSRHFGGLKVLQDVNLDIPKGGIFGLIGPNGAGKTTVFNLITGLLPTTSGTIHF 65

Query: 63  DDNDISILPMHSRSRMGIGYLPQEASIFRKLSVEDNI------------MAVLQTREELT 110
              D++       +R GI    Q   IF+++S+ +N+            + +L +     
Sbjct: 66  QGQDLAGRKPFQITRGGIARTFQNIRIFKEMSLLENVTVGMDAKLRYGPLGLLASTGMFR 125

Query: 111 HEERQ--DKLEDLLEEFHIQHIRKSAGMALSGGERRRVEIARALAANPQFILLDEPFAGV 168
            EE++  D+  +LL    + H        LS G++R++E+ARALA  P  +LLDEP AG+
Sbjct: 126 SEEKRARDRARELLSWVKLDHKANDVADNLSYGDQRKLELARALATEPTLLLLDEPVAGM 185

Query: 169 DPISVIDIKKIIEHLRDRGLGVLITDHNVRETLDVCEKAYIVSQGRLIAEGTPQDVLNNE 228
           +     ++   IE++  RG  V + +H++R  + +C++  +++ GR+IA G P+ + N+ 
Sbjct: 186 NSTEKSELMVEIENIAARGFTVFMIEHDMRFVMGLCQQIAVLNFGRIIARGGPEQIRNDP 245

Query: 229 QVKQVYLGEQ 238
           QV + YLG +
Sbjct: 246 QVIEAYLGRE 255