Pairwise Alignments

Query, 241 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  145 bits (367), Expect = 5e-40
 Identities = 85/241 (35%), Positives = 138/241 (57%), Gaps = 14/241 (5%)

Query: 3   ILKAQHLAKSYKKRKVVSDVSLQVESGQIVGLLGPNGAGKTTSFYMIVGLVARDEGTITI 62
           +LK + +  SY   + V  VSL+V +G++V ++G NGAGK+T    IVGL    EG + I
Sbjct: 1   MLKIESVKVSYGAIEAVKGVSLEVRAGEVVTIIGANGAGKSTLLKSIVGLEPVAEGRVLI 60

Query: 63  DDNDISILPMHSRSRMGIGYLPQEASIFRKLSVEDNIMAVLQTREELTHEERQDK--LED 120
           D ND + +P H R  +G+   P+   +F   +V +N+M    +R       R DK  +E+
Sbjct: 61  DGNDCTHVPSHKRVGLGVALSPEGRGVFPDQTVRENLMLGAYSR-------RNDKAFVEN 113

Query: 121 LLE-EF----HIQHIRKSAGMALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVID 175
            +E EF     ++  +      LSGGE++ + IARAL + P+ +LLDEP  G+ P+ + D
Sbjct: 114 AIEREFARFPRLKERQHQPSGTLSGGEQQMLAIARALMSEPRLLLLDEPSLGLAPLIIKD 173

Query: 176 IKKIIEHLRDRGLGVLITDHNVRETLDVCEKAYIVSQGRLIAEGTPQDVLNNEQVKQVYL 235
           I   I  LR  GL +L+ +   ++ L V ++AY++  G +  EG+ +++L+N +VK  YL
Sbjct: 174 IFDAIRQLRSSGLTILLVEQMAKQALGVADRAYVLETGCITLEGSGRELLDNPKVKSAYL 233

Query: 236 G 236
           G
Sbjct: 234 G 234