Pairwise Alignments

Query, 241 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., LPS export ABC transporter ATP-binding protein from Paraburkholderia sabiae LMG 24235

 Score =  295 bits (754), Expect = 8e-85
 Identities = 145/243 (59%), Positives = 188/243 (77%), Gaps = 5/243 (2%)

Query: 4   LKAQHLAKSYKKRKVVSDVSLQVESGQIVGLLGPNGAGKTTSFYMIVGLVARDEGTITID 63
           L  ++L K Y  R VV DVSL V+SG++VGLLGPNGAGKTTSFYMIVGLV  D G I +D
Sbjct: 18  LVVRNLKKRYGSRTVVKDVSLDVKSGEVVGLLGPNGAGKTTSFYMIVGLVPLDAGEIDLD 77

Query: 64  DNDISILPMHSRSRMGIGYLPQEASIFRKLSVEDNIMAVLQTR-----EELTHEERQDKL 118
              IS+LP+H R+ +G+ YLPQEAS+FRKLSVE+NI AVL+ +     + L+ +    + 
Sbjct: 78  GKSISLLPIHKRASLGLSYLPQEASVFRKLSVEENIRAVLELQVGEDGKRLSKDAIASRT 137

Query: 119 EDLLEEFHIQHIRKSAGMALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVIDIKK 178
           E LL+E  I H+R++  ++LSGGERRRVEIARALA NP FILLDEPFAGVDPI+V++I+K
Sbjct: 138 EALLDELQISHLRENPALSLSGGERRRVEIARALATNPSFILLDEPFAGVDPIAVLEIQK 197

Query: 179 IIEHLRDRGLGVLITDHNVRETLDVCEKAYIVSQGRLIAEGTPQDVLNNEQVKQVYLGEQ 238
           I++ L+ R +GVLITDHNVRETL +C+ AYI+S G ++A G P D++ NE V++VYLGE 
Sbjct: 198 IVKFLKQRNIGVLITDHNVRETLGICDHAYIISDGSVLAAGAPGDIIENESVRRVYLGEH 257

Query: 239 FRL 241
           FR+
Sbjct: 258 FRM 260