Pairwise Alignments

Query, 241 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  293 bits (751), Expect = 2e-84
 Identities = 144/243 (59%), Positives = 188/243 (77%), Gaps = 5/243 (2%)

Query: 4   LKAQHLAKSYKKRKVVSDVSLQVESGQIVGLLGPNGAGKTTSFYMIVGLVARDEGTITID 63
           L+A+ L KSY  RKVV DVSL V  G++VGLLGPNGAGKTTSFYM+VGL+  D G I +D
Sbjct: 23  LEARGLQKSYGSRKVVKDVSLAVFKGEVVGLLGPNGAGKTTSFYMLVGLLRSDAGQILLD 82

Query: 64  DNDISILPMHSRSRMGIGYLPQEASIFRKLSVEDNIMAVLQTREE-----LTHEERQDKL 118
           +  I  LP+H R+R+G+GYLPQEASIFRKLSV DN+ AVL+ + +     L     + +L
Sbjct: 83  NQAIESLPIHRRARLGLGYLPQEASIFRKLSVADNVRAVLELQVDEQGKPLDRATIESRL 142

Query: 119 EDLLEEFHIQHIRKSAGMALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVIDIKK 178
           + LL++ H+ H+R S   ALSGGERRRVEIARALA  P+FILLDEPFAG+DPI+VI+I++
Sbjct: 143 DALLQDLHVDHLRDSPAPALSGGERRRVEIARALATEPRFILLDEPFAGIDPIAVIEIQR 202

Query: 179 IIEHLRDRGLGVLITDHNVRETLDVCEKAYIVSQGRLIAEGTPQDVLNNEQVKQVYLGEQ 238
           II  L+ RG+GVLITDHNVRETL +C++AYI++ G ++  GTP +++ N  V++VYLGE 
Sbjct: 203 IIGFLKSRGIGVLITDHNVRETLGICDRAYIINDGHVLTSGTPAEIVENADVRRVYLGEH 262

Query: 239 FRL 241
           FR+
Sbjct: 263 FRM 265